| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1914 |
|---|
| Symbol | |
|---|
| ID | 3580822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2238702 |
|---|
| End bp | 2239991 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685606 |
|---|
| Product | metalloprotease |
|---|
| Protein accession | YP_289970 |
|---|
| Protein GI | 72162313 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGCTT CTCCGCTGTC CACCCCCGAC GACGAAGGAC CCCCCGTGGA GACGCCTCGC
GGCGGCGCTG CCGCCCCGGA TCCGACCCCT CAGGCTTCTT CTCAGGACGA CACTCCAATC
CCGCCTTCGG TGACGCAGCA CAGCAGCCCC GTACCCCCGC TTCCGGGGAC GGGAGCCGCG
GAACCGCGCG CGGATGCGAG CCCTCTCCCG GCTTCCTGGA CGCCCGCCGG GCCCCCGCCC
CCAAGTTTCC GCCCGCTGCC CCCCAACCCG CCAGAGGCCC CGCCGCCCTC CCCCCAGTAC
CGGCAGGAGC TGACCGCGGC CCACGTCACT CCCCAGTTCT CTGCCCCCGC CGCGTTCGAC
GGCGCCTTCG GCGCCTGGGA GCAGCACCCT CCTCTCGCCC CGCCCCCGCG GCAGGGTGAT
GTGCGGCTCT GGCTGGCTGC GATGGGAACC GCGTTCGTTG CCGCGCTCTG CCTCGTGCTG
TGTGCCGTGA TGACAGCGGC GACGCTGCGC GGCGGCACAG TCCACGCGTC CGGTAAGCCG
CACCGGGATG TCCGCTACGC AGACTCCTGG TTCCACACCG CCGGAGCCAT CCCGGTCGAC
GTCGCCGACC ACCCCTTCTA TGCCCTGCCC GCCCCCGGCG CCGTGGCATG CGAGATCCCC
GAGTTCAACG CCGCCACGGT GGCGGGGTGG GAGGAGTTCA CCGAGGTGAT CGGCCCCTGC
CTCAACGCGA TGTGGCTCTC CCCGCTAGAA GAGCTCGGGC TGCGCCCGCA GGAGCCGCAC
TACGTGATCC TCGACGAGAT CCCCGCGGAG CTGCGCGACG AGTCCGAGGA AGAAGGAGTC
ACCCTCGCCT ACTACTTGGA GCACGAGCTG AGCATCACCA TCCTCGTGCC CAACGTGCGG
AAACTCCTGC GGTACCCGGG CATGGACGAC AAGCGCATCT GGTTTGCCCT GGTCGCCCAC
GAATACGGGC ACCACCTCCA AGGGGAGACC GGTCTTCTTG ACGCGGCCTA CACCCTGCAG
CTTGATGCCA AGTCCACGCG CCAAGAACTC CAGTTGGGAC GGCAGATCGA ACTGCAAGCC
GAATGCCTGG CAGGGACCGG GGTTGCCGCT ATCGCCGGCC ACGACCACGC CGACGTGGCG
TTCGTCAACC GCAACTTCAA CGAAGGCACG GGGGACAGCG ACACCCACGG CAGTGCCGAC
AACCGCGTCC ACTGGTTCAA CGCCGGAGCC ACCGCGGAGA CCATGGCGGC GTGCAACACT
TTCGCGGCCG AAGACCGCTT GGTCCGCTAG
|
|---|
| Protein sequence | MWASPLSTPD DEGPPVETPR GGAAAPDPTP QASSQDDTPI PPSVTQHSSP VPPLPGTGAA
EPRADASPLP ASWTPAGPPP PSFRPLPPNP PEAPPPSPQY RQELTAAHVT PQFSAPAAFD
GAFGAWEQHP PLAPPPRQGD VRLWLAAMGT AFVAALCLVL CAVMTAATLR GGTVHASGKP
HRDVRYADSW FHTAGAIPVD VADHPFYALP APGAVACEIP EFNAATVAGW EEFTEVIGPC
LNAMWLSPLE ELGLRPQEPH YVILDEIPAE LRDESEEEGV TLAYYLEHEL SITILVPNVR
KLLRYPGMDD KRIWFALVAH EYGHHLQGET GLLDAAYTLQ LDAKSTRQEL QLGRQIELQA
ECLAGTGVAA IAGHDHADVA FVNRNFNEGT GDSDTHGSAD NRVHWFNAGA TAETMAACNT
FAAEDRLVR
|
|---|
| |