Gene Tfu_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1874 
Symbol 
ID3579457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp2197332 
End bp2198066 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID637685566 
Producthypothetical protein 
Protein accessionYP_289930 
Protein GI72162273 
COG category[S] Function unknown 
COG ID[COG3689] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGCC TGGCGCAGGG CATGGTGATG GTGCTGCTGG GAGCGGCTGC GCTGAGTGTG 
ACTGTGGCCT CCCAGGACTA CCTCAACTAC GTGCGCGGCG AGTTCCGGCC GTTCCTGATC 
GCCGCCGGGG CAGTGCTGGT GCTGCTCGGC CTGGTGGCGG TGGTCGCGGA ACTGCGATCG 
CCGGAGGATG AGGCGGAACC GGGGCATGAT CCCGCCCACG GCCACAACCA CGGGCGGGCT 
CCGGTGGTGG CGTGGCTGCT GTTGCTGCCG GTCGTGGTGA TCTTCGTGGT GGCGCCGCCC 
GCGCTGGGGG CCTACACGGC GGCGGCAGCC GACCCCGCAG CAGCGGTGGA ACGCGCCCTG 
CCGGATGACG TCCCCGCAGA CACCCCTGAT GCGGACGGGC CGGTGGAGAT GTCGCTGCGC 
GAATTCGTGG TGCGGGCCTG GACCGACGAA GAGCGCAGCA TGGCCGGACG GGAGATCCGG 
CTTACCGGGT TCGCGGTGCC CAACCCGGAC GGGGAGGGCT GGTACCTGGC CCGGCTCCAG 
ATCGCCTGTT GCGCCGCCGA CGCCATCGTG AACCGGGTGC TGATCGTCAA CCAGGAGGAG 
CCGCCCGCGG ATTCGTGGTG GACCGTAACC GGCCGGTGGG TGGAACCGGA GGGTGACATT 
CGCCGGGTGC GCGACCACCG GTTCGAGGTG ACAGAGATGG TCCCCGTCGA CCATCCTCCC 
GACCCCTACG AGTAG
 
Protein sequence
MNRLAQGMVM VLLGAAALSV TVASQDYLNY VRGEFRPFLI AAGAVLVLLG LVAVVAELRS 
PEDEAEPGHD PAHGHNHGRA PVVAWLLLLP VVVIFVVAPP ALGAYTAAAA DPAAAVERAL 
PDDVPADTPD ADGPVEMSLR EFVVRAWTDE ERSMAGREIR LTGFAVPNPD GEGWYLARLQ 
IACCAADAIV NRVLIVNQEE PPADSWWTVT GRWVEPEGDI RRVRDHRFEV TEMVPVDHPP 
DPYE