| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1821 |
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| Symbol | |
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| ID | 3579112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2122466 |
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| End bp | 2124229 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685513 |
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| Product | putative peptide transport system substrate-binding protein |
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| Protein accession | YP_289877 |
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| Protein GI | 72162220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAAAC GTGTCATGGG ATTCGCCGCA CTGAGTGCGG CGGCCGCCCT CATGCTCGCC
GCTTGCGGCG GTGACAGCGG CAGCAGCGGG GGCGGCAGCG GCAACGGTGC CGGCTTCGAC
AAGGGCAGCA CCGAAATCGT CAACCCCTCC GACGCCAAGG GCGGTACCCT GCGGTTCGCG
ATCTCCGCCA ACATGGAGAG CACCGACCCG GGCAACACCT ACTACGGCTA CGTGTGGAAC
TTCAGCCGCT ACTACGCCCG CACACTCCTC ACCTATGCGG CTGCCCCGGG CGAGGCGGGA
ACCGAGCTGG TCCCCGACCT GGCCGCAGAC ATGCCCGAGG TCAGCGACGA CGGCACCGAG
TGGACCGTCA AGCTCAAGGA AGGCCTCAAG TACGAGGACG GCACCGAGAT CGTCGCCGAG
CACATCAAGT ACGCGATCGC GCGCAGCAAC TTCGGCGACC AGGCGCTGCC CAACGGCCCC
AAGTACTTCC AGCAGCTCCT CGACGAGGAC GACTACGACG GCCCCTACGG CGGCGGTGAC
CCGCTGGAAG GCTTCGACGC GATCGAAACC CCGGACGACT ACACCCTCGT CTTCCACCTC
AAGGAACCGT TCTCGGATTT CCTCTACGTC CTCGCGCAGC CGCAGACCGC TCCGGTGCCG
CCCGAGGCCG ACAAGGGCGA GCAGTACCAG ACCCGCGTGG TCTCCTCCGG CCCCTACAAG
TTCGAAGACG ACTACACCCC CGGCAACGGC CTGGTCCTGG TCCGCAACGA AGAGTGGGAC
CCGGACAGTG ACCCGATCCG CACCGCACTG CCCGACCGGA TCACCGTTGA GGAAGGCGTC
GACCAGAACG AGATCGACCA GCGCCTCGTC AACGGAGAGC TCGACGTGGA CCTGGCCGGC
ACCGGCCTGG GCCCGGCGAT GAAGGGCAAG CTCGTCGCCG ACGAGGAGGC GCGCGCCAAC
ATCGACAACC CGACCACCGG CGCCCACTTC TACGTCAACA TCAACACCAA GGTCGAGCCG
CTGGACAACC TCGCCTGCCG CCAGGCCATC CAGTACGCGG TCGGCCGCGA AGGCATCCAG
CGCGCCTACG GCGGTGAACT GGGCGGTGAA ATCGCCACCC AGGTGCTGCC CCCGGACATC
CCCGGTGCCG ACCCCTCCTA CGACCCCTAC GACGCGGCTT CCGGCAAGCC CAACGTGGAG
AAGGCCAAGG AGAAGCTGGA AGAGTGCGGC CACCCCGACG GCTTCGCAGT CAACATCGGC
GTCCGCTCCG ACCGTCCCGC TGAAGTCGAC GCGGTCGAGG CGATCCAGCA GGACCTGGCC
CAGGTCGGCA TCGAGGCCAA GGTCAAGGGC TACCCGTCGG ACACCTACAC CAACACCCAG
GCCGGCTCGC CTGACTTCGT CGCCGAGAAC AAGCTCGGCC TGACCTACTA CGGCTGGATG
GCGGACTGGC CCTCCGGCTA CGGCTTCATG AGCTCCATCC TGGACGGCGA CGCCATCAAG
CAGGCGGGTA ACTCCAACAT CGCCGAACTG GACGACCCGG AGATCAACAA GCTGTTCGAC
GAGGTCGTCA GCGTCGAGGA CCCGGAAGAG CAGGCCGCGA TCTACGCCGA GATCGACCGG
CTGACCATGG AGAACGCCGC CATCCTCACC GGCGTCTTCC AGAAGTCCGT GATCTACCGG
CCCGACAACC TGACCAACGT CTTCTTCAAC CCGAGCTGGC ACATGTACGA CTACATGACG
CTCGGCACCA CCGAAACCGA GTAG
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| Protein sequence | MNKRVMGFAA LSAAAALMLA ACGGDSGSSG GGSGNGAGFD KGSTEIVNPS DAKGGTLRFA
ISANMESTDP GNTYYGYVWN FSRYYARTLL TYAAAPGEAG TELVPDLAAD MPEVSDDGTE
WTVKLKEGLK YEDGTEIVAE HIKYAIARSN FGDQALPNGP KYFQQLLDED DYDGPYGGGD
PLEGFDAIET PDDYTLVFHL KEPFSDFLYV LAQPQTAPVP PEADKGEQYQ TRVVSSGPYK
FEDDYTPGNG LVLVRNEEWD PDSDPIRTAL PDRITVEEGV DQNEIDQRLV NGELDVDLAG
TGLGPAMKGK LVADEEARAN IDNPTTGAHF YVNINTKVEP LDNLACRQAI QYAVGREGIQ
RAYGGELGGE IATQVLPPDI PGADPSYDPY DAASGKPNVE KAKEKLEECG HPDGFAVNIG
VRSDRPAEVD AVEAIQQDLA QVGIEAKVKG YPSDTYTNTQ AGSPDFVAEN KLGLTYYGWM
ADWPSGYGFM SSILDGDAIK QAGNSNIAEL DDPEINKLFD EVVSVEDPEE QAAIYAEIDR
LTMENAAILT GVFQKSVIYR PDNLTNVFFN PSWHMYDYMT LGTTETE
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