Gene Tfu_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1721 
Symbol 
ID3581660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2002487 
End bp2003641 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID637685415 
Productputative oxidoreductase 
Protein accessionYP_289779 
Protein GI72162122 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.777157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGATC GCGTGCTCGG TATCGCCATG AACGGCGTCA CCGGACGCAT GGGATACCGC 
CAGCATCTGA CCAGGTCGGT CCTGGCCATC CGCAAGGACG GCGGGGTGGA GCTACCCGAC
GGCTCCCGCA TCATCCCGGA ACCGGTGCTC GTGGGGCGGT CCGCACAGAA GCTGCGCGCC
ATCGCTGAGC GGCACGGCAT TGAGCGGTGG AGCACCGACC TCGACACGGT CCTCTCTGAC
GACTCGATCT CGGTGTACTT CGACGCGCAG ATCACGCACG CCCGCGAAGC CGCGGTTCGG
AGCGCCATCA ACGCGGGCAA GCACGTCTAC GTCGAAAAGC CGATCGCCGA CAACTTCAGT
GCCGCCATCG AACTGGCCAA GCTGGCCCGC GACGCCGGCG TGAAGAACGG CGTCGTCCAG
GACAAGCTCT TCCTCCCCGG CCTGCTCAAG CTCCGCCGCC TCATCGACAG CGGGTTCTTC
GGCCGCATCC TGTCCATCCG CGGCGAGTTC GGCTACTGGG TGTTCGAAGG CGACTGGCAG
CCCGCGCAGC GCCCCAGTTG GAACTACCGG GCCGAAGACG GCGGCGGCAT CGTGCTGGAC
ATGTTCCCGC ACTGGCACTA CATCCTGGAG CAGCTCTTCG CCCCGGTGCG CACCGTGACC
ACGCGCATCG CCACCCACAT CCCTGAACGC TGGGACGAAA ACGGGCAGCG CTACCAGGCC
ACTGCCGACG ACGCCGCTTA TGCGGTGTTC GAACTGGAAG GCGGAATCGT CGCGCAGATC
AACTCCTCCT GGTCGGTGCG GGTCAACCGG GATGAACTGG TGGAGTTCCA GGTGGACGGC
ACCCACGGCA GCGCGGTTGC GGGACTGCGG CACTGCAAGG TGCAGCACCG CTCCGTCACA
CCCAAGGCCG TGTGGGACCC CGACGCGGTG GACCCGGGCG GCTACCGCGA CCAGTGGGAG
GTCGTTCCTG ACAACGGCGA CTTCCCCAAC GGTTTCCGTG CCCAGTGGGA GCTGTTCCTC
ACCCACCTGT ACACGGATGT GCCTTTCCCC CACGACCTGC TCTCGGGCGT GCGCGGCCTC
CAACTCGCCG AAGCGGGGCT GCAGTCCGCC AAGACCGGTC GCACCGTGGA GTTGGAGGAG
GTCTCGCTGC CGTGA
 
Protein sequence
MGDRVLGIAM NGVTGRMGYR QHLTRSVLAI RKDGGVELPD GSRIIPEPVL VGRSAQKLRA 
IAERHGIERW STDLDTVLSD DSISVYFDAQ ITHAREAAVR SAINAGKHVY VEKPIADNFS
AAIELAKLAR DAGVKNGVVQ DKLFLPGLLK LRRLIDSGFF GRILSIRGEF GYWVFEGDWQ
PAQRPSWNYR AEDGGGIVLD MFPHWHYILE QLFAPVRTVT TRIATHIPER WDENGQRYQA
TADDAAYAVF ELEGGIVAQI NSSWSVRVNR DELVEFQVDG THGSAVAGLR HCKVQHRSVT
PKAVWDPDAV DPGGYRDQWE VVPDNGDFPN GFRAQWELFL THLYTDVPFP HDLLSGVRGL
QLAEAGLQSA KTGRTVELEE VSLP