| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1580 |
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| Symbol | |
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| ID | 3581944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1822493 |
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| End bp | 1823395 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637685275 |
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| Product | CRISPR-associated RAMP Cmr4 family protein family protein |
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| Protein accession | YP_289639 |
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| Protein GI | 72161982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02580] CRISPR-associated RAMP protein, Cmr4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGCTT TTCTGCTGTA CCTGTACGCG GAATCCCCGC TGCATGCCGG CGCCGCAGCC
AGCGACGGCG TCCTCGACCT GCCGATTCAA CGAGAAAGCA GCACCAACTA TCCGCTCATC
TGGGGGCAGA GCCTCAAGGG TGCGCTGCGG CAGACCGCCC GCGACGCTGG CTGGAGCGAA
GACACCTTGA AGGAGGTGTT CGGATCCGAG CCAGGCGAAG GAGAAGAAAC CACCCCTGGA
AAACTCGCAG TGGGCGATGC TCAACTTGTT GCGCTTCCGG TCCCCACCTT GCGCCGCTCC
TTTGCCTGGG TCACTTCCCG GCTTGCTCTC AGCCGTCTGG CCCGCAAATA CGCCATCATC
AACGGCCCCC ACGTCGTGCT TCCTGAAGTC CCCAACCCCG CCGACGGGGA GGGCTCCTGC
GGTCGAGGGT TCTGGGGCGG GGAAACGCCG GAGGTGCTCG GCCCATGCCT CGTCAAGCTT
CACAATCCTC GTGGAGGCGG TGACGCCCCT GATCCCGTCA CTGACTGGGC ACGGCTCTTG
GCTGCCGACG CTATTGGCGA CGCCCCCCAT TTGCGCCCTT TCGCTAGCAA ACTCGCAGAA
GACCTGCTGG TTGTCGGCTC CGAGCCGATG TCTGTTCTCC TGCGCGAGTG CACCGAGTTC
GCGGTACGGG TCCAACTCCA CCGTCAACAG AAGCTGGTTC AAAACGGTCC CTTCGTCAGC
GAATACCTCC CTGCCGAAAC GATTCTCGCC TCCGTGCTGA CCCTGCGTGG GAAATACGCT
CCGGAAGAAG TCCAGCAGCT GCGGGACCTG GTGAACCATT CCCTCCTCCA AGTGGGCGGA
GACGAAACCC TCGGCAAAGG GCTGGTGTGG ACCCGGATCG TCGAAGGAGA ACGCAATGGC
TGA
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| Protein sequence | MTAFLLYLYA ESPLHAGAAA SDGVLDLPIQ RESSTNYPLI WGQSLKGALR QTARDAGWSE
DTLKEVFGSE PGEGEETTPG KLAVGDAQLV ALPVPTLRRS FAWVTSRLAL SRLARKYAII
NGPHVVLPEV PNPADGEGSC GRGFWGGETP EVLGPCLVKL HNPRGGGDAP DPVTDWARLL
AADAIGDAPH LRPFASKLAE DLLVVGSEPM SVLLRECTEF AVRVQLHRQQ KLVQNGPFVS
EYLPAETILA SVLTLRGKYA PEEVQQLRDL VNHSLLQVGG DETLGKGLVW TRIVEGERNG
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