| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1578 |
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| Symbol | |
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| ID | 3581942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1819567 |
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| End bp | 1821351 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637685273 |
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| Product | CRISPR-associated Cmr2 family protein |
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| Protein accession | YP_289637 |
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| Protein GI | 72161980 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02577] CRISPR-associated protein, Crm2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGGCC AAGACCTCGT GGTGATCGCA CTGTCCGGAG TCCAGCGATT CATCGAAGAA
TCCAGAAGCA CCTCGGACCT GCGGGCAGGC AGCCGAATCA TCGCTGAGCT CACCGAACAA
GCCGTGTCCG TGTGCCAGGA GTCCGCTGCC GAACTCGTCT TCCCCGCCCC GAGCAAGAAA
AGGAAAGACG TGGGAATGCC TAACCGGGTG GTGGCACTCG CCCCCGCAGG GCAGGGGACG
ACACTTGCTC AGCGAGCCAC CGCACGGGTG AATGAGAAGT GGAAGGAGTG GTTGCAAAAG
ACTCTTGGCC GTATCGAAGA AACCCCCGGT ATGCCCGCCG TGACGTGGGC CGTAGCTCCC
CCACGGCCAG GCGGCTACCC CGAACAGTGG AAAGAAGCCC AACGTCGCCT AGCCGCACGC
AAACAGGTCC GGAACTTCAC CGCCCTGGAG GCACGCAACG GCCCCTGCCA GCTGAGTCCT
CACTGGCCCG CGACCACGAA GCCACCGAAA GGTCTTCCCT CTTTTGAGCG TGACACGCTG
AGCGCTGCCA ACTGGCTGAA ACGCAAGCTT GGCCGCCCCA ATGATAAGGA GAGCGTGTCA
CCTTACGGGA TCCCCTCGAC CTACGGGATC GCGTCGGCCC CATTCCGCAT CGAAGTTCTG
AAAAATATCA ACGATCCGGA TGTAACTGAA CAGGTGGACT ACTTGCATCA AGTAGTCCAG
GACGAAGATA CGGGCATACA TATCCCCAAC TGGCCACTGC CAGGCATGCC GAAACCTCAG
GGAGAATTAG CCCAGTGGCT GTGGCGGCAC GGAGGACAGT GGGTTTACAC AGACTCATGG
TCCGCAGAGT CGCTGGCCCG CGAATTCAGG AAGCCGACTT CTGGAGAAGC ATTCGACAAC
TTCTCCAGAA CAGTAGAGAT AGGCCGTATT GCTGCCGCTG ATCTTCAAAA GATCATGCGG
GACAAGTTCC AGGTAGCGCC TCCCTCCTCC TACCTGGCGA TTCTTGTCCA AGACCTGGAC
GGCATGGGCT CCTACCTCTC CGAGGAAAAG AACCTGTCGC ACAAGCGGCA CACCGAAATT
TCTGACCAGT TGCGGAGAGT CGCTGAAAGG CAGACAGAAC TGCTGCACGA CTCGGCGCTG
CTGGGCGTTG CAGTCTATGC CGGCGGAGAC GACCTGCTGG CGTTCCTTCC CGCAGCGACA
GCCCTTGCGG GGGCACGCGC CTGCAGACAG GCAGTCACCG AAGTATCCCC GGAACTGCCC
ACGGCGAGCA GTGCCTTACT GTTCTTCCAC CGCAAATACC CGTTGCGGCT CGCCTTGGCC
GCGAGCCGGG AAGCCCTGGC TGCCGCCAAA AACGTTCCTG GAAAGAACGC TCTCGCCGTG
AGCTACCTGC GCCGCTCCGG AACCCAGGAA ACATACGTCC AGAAATGGGC TCTTCCTGAC
CACAACGATC CCGAGGCCTT GGTGTGTGAC CGCCTGTCCC TCTTCACCAG GAGTGAGACG
GGAGCACGGC TATCCCCCGG GCTACTGCGG GACCTGGAAC GCGACAGTCA CGCCCTATGC
ACGCTCAGTC TGGACCTCTT TACCGCTGAG CTCCAGCGCC TCGTCCACCG GCATACTCTC
GCGCCCACCA GCGAGCAACA AAAAGCATTT GCCCTCAAGG CTGCAGAGCA GCTCCGCCTT
CTGGGACGGC CCACCAGCGC CCTAGAAGAC TCAGAAAAGA TTTCCGAACA ATCACTGATC
GCGGCGGCTC GAGTCGCAGT GTTCTTGCGT CAGGAGTGCC GATGA
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| Protein sequence | MDGQDLVVIA LSGVQRFIEE SRSTSDLRAG SRIIAELTEQ AVSVCQESAA ELVFPAPSKK
RKDVGMPNRV VALAPAGQGT TLAQRATARV NEKWKEWLQK TLGRIEETPG MPAVTWAVAP
PRPGGYPEQW KEAQRRLAAR KQVRNFTALE ARNGPCQLSP HWPATTKPPK GLPSFERDTL
SAANWLKRKL GRPNDKESVS PYGIPSTYGI ASAPFRIEVL KNINDPDVTE QVDYLHQVVQ
DEDTGIHIPN WPLPGMPKPQ GELAQWLWRH GGQWVYTDSW SAESLAREFR KPTSGEAFDN
FSRTVEIGRI AAADLQKIMR DKFQVAPPSS YLAILVQDLD GMGSYLSEEK NLSHKRHTEI
SDQLRRVAER QTELLHDSAL LGVAVYAGGD DLLAFLPAAT ALAGARACRQ AVTEVSPELP
TASSALLFFH RKYPLRLALA ASREALAAAK NVPGKNALAV SYLRRSGTQE TYVQKWALPD
HNDPEALVCD RLSLFTRSET GARLSPGLLR DLERDSHALC TLSLDLFTAE LQRLVHRHTL
APTSEQQKAF ALKAAEQLRL LGRPTSALED SEKISEQSLI AAARVAVFLR QECR
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