Gene Tfu_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1496 
Symbol 
ID3581689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1728765 
End bp1730018 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content67% 
IMG OID637685191 
ProductFMNH2-dependent monooxygenase 
Protein accessionYP_289555 
Protein GI72161898 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.093324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGG AACAGACCGA ACGGCCCGCC GAAACTTCCC CGGCCGGGTC TTGGAACGAC 
CGCCCAGCCC CGCGCACCCC AGCCGAGTGG CTCACCCGGG CCGCCGAAGT CGGCGCGATC
CTCGCCGCCG ACGCTGTGGA ACGCGACCGC GCCGGCCAAA CCCCGTACGC CGAAGTCCAA
CTCCTCAAAG ACTCGGGCCT GGTCACCCTG CTCGGCCCGG TCGAATACGG GGGCGGCGGA
CAGACCTGGG AGACCGCCTA CCGGGTGACC CGGGAAGTCT CCAAGGCCGA CGGGTCCATC
GGGCAACTGC TGGGCTACCA CTACCTGTGG TCGTGGGCGG TGCGGTTCCT CGGCACCCCG
CAGCAGATCG CCGCAGTCGA GGAGCTCGCC ACCACCAACC GGTACTTCTT CGGTGGCGCA
GTCAACCCCC GCGACGACGA CCTCGTGATC ACCGAAGACG GCGACACGCT CGTCTTCAAC
GGACGCAAAA CCTTCTCCAC TGGAAGCAAG GTCTCCGACC TCACCGTGCT AGAAGGCGTA
CTGGAAGGAA CAGACCAGCA CATTTTCGCG ATCGTCCCCT CCGCCCAGGA CGGGATCGTC
TTCGCAGACG ACTGGGACAA CATCGGCCAG CGTCTCACCG AATCCGGCAG CGTCCGGATC
ACCAACGTCC GCATCTCCTG GGACGACGCA GCAGGCTACG TCAACCGGGA GTTCCGCCCA
CTCGTCTACA ACACGCTGAA CCTGCCGGCC ATCCAACTCG TGTTCACCAA CCTGTACCTG
GGGATCGCCC AGGGGGCGCT GGAGACCGCC GCCGCCTACA CCCGGTCCAC GACCCGGCCG
TGGCCCTACG GCGGGGACAA CAAAGAGTCC GCGGTCGACG AGTGGTACAT CCTCGAAGCC
TACGGGGACC TGCAGTCGAA GCTGTGGTCC GTGGAGGCGC TCACCGACCA GGTCGGCACG
CAGCTCTCCC AGATCCTCCA CGGCGACCGG GAAGCCGTGA CCGCACGCCA GCGCGGCGAG
ATCGCGGTCC GGGTTGCGGC CGCCAAGCAG CGGGCTATCG ACGTCGGCTT GGAGGTCACG
TCCCGCATCT TCGAAGTCAC AGGTGCGCGG GCCACCGCAT CGTCGGTGGG GCTCGACCGG
TTCTGGCGCA ACCTGCGCAC TCACAGCCTG CACGACCCAG TGGCCTACAA GCGGCGCGAA
GTGGGACGCT ACACGCTGCT CAACGAGATC CCTGAACCCA CCTGGTACAC CTGA
 
Protein sequence
MSTEQTERPA ETSPAGSWND RPAPRTPAEW LTRAAEVGAI LAADAVERDR AGQTPYAEVQ 
LLKDSGLVTL LGPVEYGGGG QTWETAYRVT REVSKADGSI GQLLGYHYLW SWAVRFLGTP
QQIAAVEELA TTNRYFFGGA VNPRDDDLVI TEDGDTLVFN GRKTFSTGSK VSDLTVLEGV
LEGTDQHIFA IVPSAQDGIV FADDWDNIGQ RLTESGSVRI TNVRISWDDA AGYVNREFRP
LVYNTLNLPA IQLVFTNLYL GIAQGALETA AAYTRSTTRP WPYGGDNKES AVDEWYILEA
YGDLQSKLWS VEALTDQVGT QLSQILHGDR EAVTARQRGE IAVRVAAAKQ RAIDVGLEVT
SRIFEVTGAR ATASSVGLDR FWRNLRTHSL HDPVAYKRRE VGRYTLLNEI PEPTWYT