Gene Tfu_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1484 
Symbol 
ID3581677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1713734 
End bp1714903 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content68% 
IMG OID637685179 
Producthypothetical protein 
Protein accessionYP_289543 
Protein GI72161886 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.185234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACATCA CCCCCACCGC TATCGCCGGG CTCGGCATGA CCCAACTCGG CAAGGTCTAC 
GGCCGCACCC CCGCCGAGTT CGCTGTGGAA GCCGTTACCC GGGCCGCCGC GGACGCGGGA
CTCGCCCTGG CCGACATTGA CGGGCTCCTG GTCAACCCGG GGGTCAACAA CGACACGGAC
CTGCGCCTGC AGTCCACCCT GCAGTTGCGG GACCTGCGGC TGCTGACCAC GATCCAAGGC
TTCGGCTCCT CGGCGATCCA AATGGTCCAA TACGCCTCCA TGGCGATTTC TGCCGGCATG
GCGAACGTGG TCGCCTGCGT CTACGCCGAT GCGCCGCTGA AAGAAGGCCG GGGCAGCGGG
GCCGCCTACG CGGGCGGCAA CCGCCCGCTG ACCGGGGTGG AAGCACTGCC CGCTGCTGCC
GGGTTGAAAT CGGCCCCGGC CCGGTACGCG ATCGCGGCCC GCCGCCACAT GGAGACCTAC
GGCACCACCA GTGAACAACT GGGGGCGGTC GCGGTCGCCG CTCGCGCCTG GGCAGCAATG
AACCCGCTGG CGCAGATGCG GGAGCCGATC ACTATTGACG ACCACCAGAA TTCGCGGATG
ATCGCTGACC CGCTGCGGCT GCTCGACTGC TGTCTGGTCA GCAACGGTGC GATCGCCATC
ATCGTCACCA GCGCGGAACG CGCCGCCGAC TTGGCCCAGC CGCCGGTCCA CATCTGGGGC
TGGGGCCAGG CTCACCCCGG CTACACCAGC TACCGCGACA GCAACTTCGG CCTGGTCAGC
GGGGCCGCAC AGTCGGGGCC CGCCGCACTG CGGATGGCTG GCGTCACCGT CGACGAGATC
GACATCCGCG AAATCTACGA CTGCTTCACC TACACCACGC TGCTCACCTT GGAGGACTAC
GGGTTCTGCG CCAAAGGCGA AGGCGGAGAG TTCGTGGCCA GCGGTGCCCT GGCCCCCGGG
GGCAGCCATC CCACGAACAC CGGCGGCGGA GAACTGTCCT CCTACTACAT GTGGGGCATG
ACCCCGCTGT CGGAGGCGGT CATCCAAGCG CGCGGCCAGG GCGGGCAGCG ACAGGTAGCC
AAAAACGACC TGATCATGGT GAGCGGCAAC GGGGGAGTCC TCGACTTTCA CGCCACGCTC
ATCGTCAGCC CGCACGCCAA GACCCGATGA
 
Protein sequence
MNITPTAIAG LGMTQLGKVY GRTPAEFAVE AVTRAAADAG LALADIDGLL VNPGVNNDTD 
LRLQSTLQLR DLRLLTTIQG FGSSAIQMVQ YASMAISAGM ANVVACVYAD APLKEGRGSG
AAYAGGNRPL TGVEALPAAA GLKSAPARYA IAARRHMETY GTTSEQLGAV AVAARAWAAM
NPLAQMREPI TIDDHQNSRM IADPLRLLDC CLVSNGAIAI IVTSAERAAD LAQPPVHIWG
WGQAHPGYTS YRDSNFGLVS GAAQSGPAAL RMAGVTVDEI DIREIYDCFT YTTLLTLEDY
GFCAKGEGGE FVASGALAPG GSHPTNTGGG ELSSYYMWGM TPLSEAVIQA RGQGGQRQVA
KNDLIMVSGN GGVLDFHATL IVSPHAKTR