Gene Tfu_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1418 
Symbol 
ID3580969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1643749 
End bp1644417 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID637685115 
Producthypothetical protein 
Protein accessionYP_289479 
Protein GI72161822 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.822292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGTC TGATCGATGT CAGCCACCAG ATCGTGGCTG GTATGACCAC CTATCCAGGG 
CTTCCCGGCC CGGTCATCGA CGACCACTTG TCGTTCGAGG ACTCTCACGA GAACTACGCC 
CCAGGCACAG AATTCGAGAT CCGCCGCATC TCGATGGTCG GCAACACGGG CACCTACCTG 
GACACTCCCT CCCACCGCTA CCGCGACGGC TCCGACCTGG CCGACCTGCC CCTGGAGAAG 
GTCGCCGCGC TGCCGGGGAG GGTGATCGAC GCCCCGGGCC GCGCCATCGG CCCCGAGGCT 
TTCGCCGGAG TGGACCTGGC CGGCCGGGCC GTGCTGCTGC GCACCGGATG GGACCGGTAC 
TGGCGCACGG AAACCTACGG CTCCCCGGAC CACCCCTACC TCACCGCGGA GGGAGCCAAG 
GCACTGGTGG ATGCCGGAGC CACCCTGGTG GGGATCGACT CGGTCAACAT CGACGACACC 
TCGGAGGCCA GTGGGGGAGC CCGCCCCGCG CATTCGATCC TCCTGGCTGC GGGAATCCCC 
GTGGTGGAGC ACTTGTGCCT GCTCAACCAG CTTCCCGAGG AGGGATTCCA GTTCTTCGCG 
GTCCCGGTGA AAGTCCGCGG CATGGGCACC ATGCCGGTCC GCGCCTTCGC TCTCGTCCCC 
TCCCCGTAG
 
Protein sequence
MARLIDVSHQ IVAGMTTYPG LPGPVIDDHL SFEDSHENYA PGTEFEIRRI SMVGNTGTYL 
DTPSHRYRDG SDLADLPLEK VAALPGRVID APGRAIGPEA FAGVDLAGRA VLLRTGWDRY 
WRTETYGSPD HPYLTAEGAK ALVDAGATLV GIDSVNIDDT SEASGGARPA HSILLAAGIP 
VVEHLCLLNQ LPEEGFQFFA VPVKVRGMGT MPVRAFALVP SP