| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1316 |
|---|
| Symbol | |
|---|
| ID | 3581762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1528688 |
|---|
| End bp | 1529461 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637685013 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289377 |
|---|
| Protein GI | 72161720 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATCC TGCTGAACGA GGTGGACCCT GCCGTCGCCC AGCCCGGCCA GGACCTCACC
GAGGCGGAAC TCGCCGCCCT GTACGCGTAC CCGGAGGAGA CCGTGGCAGA GCGGCCGTGG
GTGCGCGCCA ACTTCGTAAC CACCCTGGAC GGCGCGGTCA CCGGGGACGA CGGCCGCTCC
GGGTCGATCA ACACCGGCGC GGACCGGATC CTCTTCTCCC TCATCCGCGC CCTGTCCGAT
GTGATCGTCG CCGGCGCAGG AACCGTGCGC ACCGAAGAGT ACCAGCGGGC CCGGACCGCG
GCGCGGTGGC GTGCCGTACG CCGCGCCGGG CAACGCCCCC ACCCGGTGAT CGCGGTGGTC
AGCCGTTCTG CGAACCTCCC GCCGTCGCTC CTCGAACACC AGGAGGACGC CGGCGAAGTC
ATGCTGCTCA CCTGCCGTGC CGCGGACTCC GCTGCCCTGG ACGAGGTCCG CCAGGCGCTG
GGCGACGACC GGGTCCTCGT GCTCGGAGAG GACCGCGTCG ACCTCCGTGC CGCACTGGAC
GCGCTCGCCC AGCAGGGCCT GCGCCGGGTC TTGTGCGAAG GCGGACCGCA CCTGATGCAC
GACCTGGTCG ACGCCGACCT GGTGGACGAG CTGTGCCTGA CGCTCGCACC CCGCATCGTG
GCTGGCGACC GGCTGAGACT ACTTGCCGGT AAGCCGCTCG AACGGACGTT TGTTCCCAGA
CTGCTGGTGG AATCGGACGG CACGCTCGCC GGACGCTGGC TCCGCGGAGT GTAG
|
|---|
| Protein sequence | MRILLNEVDP AVAQPGQDLT EAELAALYAY PEETVAERPW VRANFVTTLD GAVTGDDGRS
GSINTGADRI LFSLIRALSD VIVAGAGTVR TEEYQRARTA ARWRAVRRAG QRPHPVIAVV
SRSANLPPSL LEHQEDAGEV MLLTCRAADS AALDEVRQAL GDDRVLVLGE DRVDLRAALD
ALAQQGLRRV LCEGGPHLMH DLVDADLVDE LCLTLAPRIV AGDRLRLLAG KPLERTFVPR
LLVESDGTLA GRWLRGV
|
|---|
| |