Gene Tfu_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1273 
Symbol 
ID3581072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1478843 
End bp1480033 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID637684970 
Productputative oxidoreductase 
Protein accessionYP_289334 
Protein GI72161677 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.872852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGGA TCGTCATTGT GGGAGGCGGC CTCGCCGCCT CCCGAACCTG CGAACAGCTC 
CGCAGCCGGG GATACGAGGG CGAGCTGGTC ATGCTCTGCG CCGAGCCGCA TCCCCCCTAC
GACCGGCCGC CGCTGTCGAA GGCTGCACTT CTTGAGGAGG AGCACGACTC CACCTTCCCC
ACCGACTACG CCCAGTTGTC GGTGGACGTG CGGCTCGGGG TCGCCGCCAC CGGGCTCGTC
CCCGATGCGC GCACCGTGCA GACCACTGAC GGAGAGCTGT CCTACGACGC GCTCGTCATC
GCCACCGGGG CCTCCCCGAT CCGGCTGCCC GGCCCGGGAC GCCAGTTCAC GGTCCGCACC
GTGGAGGACG CGGCCCAGCT CCGGGCCGAA CTCAAGCCCG GACAGCGGGT GGTCCTGGTG
GGAGCGAGCT GGATCAGCGC CGAGGTCGCA ACCGCGGCCC TGCGCCGGGG ATGCTCGGTG
ACCTGCATCG AAGCAGGGCC CGCTCCCCTC TCCGCTGCGC TTGGTGCAGA CGTAGGCCAG
CGCTTCCTGC CCTGGTGGTC GGAGGTGGAC TTGCGGCTGG ACACGGGAGT CGCCGAGGTC
ACCGAGACCG GGGTGCAGCT CGCCAACGGC GAGCAGGTGG ACGCCGACGT GGTCGTCACC
GGGATCGGGG TACGTCCGGC CGTCGACTGG CTGTCCGGTT CGGGGATCGC ACTGGACACC
GGGGTGGTCG TGGACGAGCA CCTGCGCACC TCCCTGCCGG GCATCTACGC CCTCGGCGAC
GTCGCGGTGC GCTGGTCGCC GCGGTGGAAC ACCCGGATCC GGGTCGAGCA CTGGGACGAC
GCGCGAGAAG CAGCCCGCAC TCTCGCTGGC GTTCTGCTCC ACGACCCGTC CAGCCAGGAC
CCGCTGCCTG TCCACGATCC GGTGCCCTAC TTCTGGAGTG ACCAGTTCGG TCACAAGATC
CAGTACGTGG GACACCACAG CCCGGAGGAC ACGCTGGTCA TCCGGGGCGA CGGCACCCCG
CAGTGGGCCG CAGCCTGGGT GGATGCCGAG GGGCGCCTCA CCGCGCACCT GAGCATCGAC
GCGCCGCGGC TGATGATCGA CGCGCGCATG GCCATCGCCG CGGGAGCCCG CCCTGACGAG
GCCGCCCTGC GCGACCCGCA GGCCAAACTC GCTCCACCTC GCGGGCGTTG A
 
Protein sequence
MERIVIVGGG LAASRTCEQL RSRGYEGELV MLCAEPHPPY DRPPLSKAAL LEEEHDSTFP 
TDYAQLSVDV RLGVAATGLV PDARTVQTTD GELSYDALVI ATGASPIRLP GPGRQFTVRT
VEDAAQLRAE LKPGQRVVLV GASWISAEVA TAALRRGCSV TCIEAGPAPL SAALGADVGQ
RFLPWWSEVD LRLDTGVAEV TETGVQLANG EQVDADVVVT GIGVRPAVDW LSGSGIALDT
GVVVDEHLRT SLPGIYALGD VAVRWSPRWN TRIRVEHWDD AREAARTLAG VLLHDPSSQD
PLPVHDPVPY FWSDQFGHKI QYVGHHSPED TLVIRGDGTP QWAAAWVDAE GRLTAHLSID
APRLMIDARM AIAAGARPDE AALRDPQAKL APPRGR