Gene Tfu_1238 details

Gene Information

• Locus tag: Tfu_1238
• ID: 3581001
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1441329
• End bp: 1441985
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637684934
• Product: response regulator receiver
• Protein accession: YP_289299
• Protein GI: 72161642
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAAGAG CGGTATCGAA AGATCTGCAG GAGGCCGGCT TCGACGTGCG AGCCGCTGCC 
ACGGGAGCGG GAGCACTGGC CCGCCACAGG GAAGCCGACG TCGTCCTCTT GGAGGTCTCC 
CTTCCCGATC TCGACGGATT CCAGGTCTGC CAGAGGATCC GCTCTCGCTC TTCCGTGCCC 
ATCATTTTCC ACAGCGTCAA GGCCACCGAG CGGGACCGCG TGCTTGGACT GAAACTCGGC 
GCCGACGACT ACGTGGTCAA ACCCTGCGGC ACCTGGGAAC TGGCCGCCCG AGTAGAAGCA 
GTGCTCCGCA GAGCAAGGGT CGCGGAAGTC CGGATTCCCC GGCAGGACCG GGGAGGCGTT 
GCCGTTGTGG GACCACTGCG CGTCGACCTC AACCAGCGCC AGGTCGAAGT CGGGGGCAGA 
AAAGTACCGC TGACCTACAA GGAATTCGAG CTGTTACGAG TCTTGATTGA ACGCCCTGGG 
CACGTCGTCA GCCGGGCAGA GATTATGCAC AAGGTATGGG GCTACACCCC GGAAAGCGAT 
ACGAGGACCC TCGGCGTGCA CATGGTCTCC CTGCGAAGAA AGCTCGCGCT GCCGTCGCTG 
ATCGAGACAG TGCGCGGCGT GGGCTACCGG ATCACCAGCG AGTTCGCGGC CGGATAG 

 

Protein sequence

MVRAVSKDLQ EAGFDVRAAA TGAGALARHR EADVVLLEVS LPDLDGFQVC QRIRSRSSVP 
IIFHSVKATE RDRVLGLKLG ADDYVVKPCG TWELAARVEA VLRRARVAEV RIPRQDRGGV 
AVVGPLRVDL NQRQVEVGGR KVPLTYKEFE LLRVLIERPG HVVSRAEIMH KVWGYTPESD 
TRTLGVHMVS LRRKLALPSL IETVRGVGYR ITSEFAAG