| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1196 |
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| Symbol | |
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| ID | 3580139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1397067 |
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| End bp | 1399172 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684892 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_289257 |
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| Protein GI | 72161600 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCGG TCACCGACAT CCAGCGCACG GACAGGCCAT TCGAAGTGGT CACAGACATG
GTCCCGGCGG GTGACCAGCC CGCCGCGATC GAGGAGCTCG CCCGACGGAT CCAAGGCGGG
GCGGCCGACA CGGTCCTGCT GGGCGCCACC GGTACCGGAA AAACCGCCAC CGTGGCTTGG
CTCATCGAGC GGCTGCAGCG CCCCACCCTG GTCATCCAGC CCAACAAGAC GCTGGCCGCG
CAGTTCGCCA ACGAGCTGCG CGAGATGATG CCCCACAACG CGGTCGAATA CTTCGTCTCC
TACTACGACT ACTACCAGCC CGAGGCCTAC GTCCCGCAGA CCGACACTTA CATCGAGAAG
GACTCCTCCA TCAACGAGGA AGTGGAGCGG CTCCGGCACT CGGCCACCAC GGCGCTACTC
ACCCGCCGCG ACACCGTTGT CGTGGCGTCC GTGTCGTGCA TCTACGGCCT GGGCACCCCG
CAGGAGTACG TCGACCGCAT GGCGACAGTC GAAGTCGGCA TGGAGATCGA CCGCGACGAG
CTGCTGCGCC GGCTCGTGGA GATGCAGTAC ACCCGCAACG ATGTCGCGTT CACCCGCGGC
ACGTTCCGGG TGCGGGGCGA CACCGTGGAG ATCATCCCGG TCTACGACGA GCTCGCGGTC
CGGATCGAAA TGTTCGGCGA CGAGATCGAA CGGCTCATGA CCCTGCACCC GATCACCGGC
GAAGTGCTGG GGGAGAGCGA CCGCGTCTAC ATCTTCCCCG CCTCCCACTA CGTGGCTGGG
CCGGAGCGGA TGCGGAAGGC CATCGCCGGC ATCCAAGCGG AACTGGAAGA GCGGCTCGCG
GAACTGGAAG CGGCCGGCAA GCTCCTCGAA GCGCAGCGGC TGCGCATGCG CACCACCTAC
GACGTGGAGA TGCTGGAGCA GATGGGCACC TGCGCGGGGG TGGAGAACTA CTCCCGCCAC
TTCGACGGGC GTGCCCCCGG AAGCCCGCCC AACACCCTGC TCGACTACTT CCCCGAAGAC
TTCCTGGTGG TCATCGACGA GTCGCACGTC ACCGTGCCGC AGATCGGCGG CATGTACGAG
GGGGACGCGG CACGGAAACG CACCCTGGTG GAACACGGCT TCCGGCTCCC CTCGGCGATG
GACAACCGGC CGCTGACCTG GGACGAGTTC CGGGAACGCA CCGGTCAGAC CCTCTACCTG
TCGGCCACCC CGGGCCCGTA CGAGCTGGAA CGCGTCGGCG GCGACGTGGT CGAGCAGGTG
ATCAGGCCGA CCGGCTTGGT GGACCCGGAG GTGATCGTCA AACCCACCGA GGGGCAGATC
GACGACCTCG TCCACGAGAT CCGGATCCGC GCCGAACGCG ACGAGCGGGT GCTGGTCACC
ACCCTGACCA AGAAGATGGC CGAGGACCTC ACCGACTATC TCACCGACCT CGGCATCCGG
GTGCGCTACC TGCACAGCGA GATCGACACG CTGCGCCGGG TGGAGCTGCT GCGCGAGCTG
CGGGTCGGTG TTTTCGACGT GCTTGTCGGC ATCAACCTGC TGCGGGAAGG GCTCGACCTG
CCCGAGGTGT CGCTTGTGGC GATCCTCGAC GCGGACAAGG AAGGATTCCT CCGCTCGGAG
CGGTCACTGA TCCAGACGAT CGGCCGGGCC GCCCGGCACG TGTCGGGGCA GGTGCACATG
TACGCCGACA CGGTCACTGA CGCCATGGCC GCGGCGATCG AGGAGACCAA CCGGCGGCGG
GCCAAACAGC TCGCCTACAA CGCGGAACAC GGCATCGACC CCAAGCCGCT GCGGAAGAAG
ATCGCCGACA TCCTCGACTC TCTGGCCCGC GAGGACGCCG ACACGGCCGA ACTGCTCGCG
CGCAGCCGCG GGGAGAAGCG GGGCACCCCC ACGCCCCGGT CCGGTGCGCT GTCCGGCCCC
GACCGGGTCG CAGAGCAGGC GAAGAACCTT CCTCGGGAGG AGCTCGCCGC CCTCGTCGAA
CAGCTCACCG AGCAGATGCA CCAGGCAGCA GCCGATCTGC AGTTCGAGCT GGCTGCCCGG
CTCAGGGACG AGATCAAGGA GCTCAAACGC GAACTCCGCG GAATGGAGGA GGCCGGAATC
GGCTGA
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| Protein sequence | MRPVTDIQRT DRPFEVVTDM VPAGDQPAAI EELARRIQGG AADTVLLGAT GTGKTATVAW
LIERLQRPTL VIQPNKTLAA QFANELREMM PHNAVEYFVS YYDYYQPEAY VPQTDTYIEK
DSSINEEVER LRHSATTALL TRRDTVVVAS VSCIYGLGTP QEYVDRMATV EVGMEIDRDE
LLRRLVEMQY TRNDVAFTRG TFRVRGDTVE IIPVYDELAV RIEMFGDEIE RLMTLHPITG
EVLGESDRVY IFPASHYVAG PERMRKAIAG IQAELEERLA ELEAAGKLLE AQRLRMRTTY
DVEMLEQMGT CAGVENYSRH FDGRAPGSPP NTLLDYFPED FLVVIDESHV TVPQIGGMYE
GDAARKRTLV EHGFRLPSAM DNRPLTWDEF RERTGQTLYL SATPGPYELE RVGGDVVEQV
IRPTGLVDPE VIVKPTEGQI DDLVHEIRIR AERDERVLVT TLTKKMAEDL TDYLTDLGIR
VRYLHSEIDT LRRVELLREL RVGVFDVLVG INLLREGLDL PEVSLVAILD ADKEGFLRSE
RSLIQTIGRA ARHVSGQVHM YADTVTDAMA AAIEETNRRR AKQLAYNAEH GIDPKPLRKK
IADILDSLAR EDADTAELLA RSRGEKRGTP TPRSGALSGP DRVAEQAKNL PREELAALVE
QLTEQMHQAA ADLQFELAAR LRDEIKELKR ELRGMEEAGI G
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