| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1174 |
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| Symbol | |
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| ID | 3580858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1370037 |
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| End bp | 1371494 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684869 |
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| Product | glutamate synthase (NADH) small subunit |
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| Protein accession | YP_289235 |
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| Protein GI | 72161578 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.153241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACC CCAAAGGCTT CCTCAAGATC ACCGAACGGG AGCTGCCCTC CCACCGGCCC
GTGCCCGTTC GGATCCAGGA CTGGCGCGAA GTCTACGAGG ACTTCGACCG CGCGGCCCTC
ATCAGGCAGG CCTCCCGCTG TATGGACTGC GGCATCCCGT TCTGCCACAA CGGCTGCCCG
CTCGGCAACC TCATCCCCGA GTGGAACGAC CTGGTCTACC GGCACGACTG GCGGGACGCC
ATCGAACGGC TGCACGCCAC CAACAACTTC CCTGAATTCA CCGGCCGCCT GTGCCCGGCC
CCGTGTGAGT CCGCGTGCGT GCTGGGCATC AACCAGCCCG CCGTGACCAT CAAGAACGTC
GAAGTGTCGA TCATCGACCG GGCCTGGGAA GAAGGCTGGG TCCGCCCGCA GCCTCCCGCC
CAGCACACCG GGAAGAAGGT CGCCGTCGTC GGCTCCGGCC CCGCAGGGCT CGCCGCCGCC
CAGCAGCTCA CCCGGGCCGG GCACACCGTC ACCGTCTACG AGCGGGCTGA CCGGATCGGC
GGACTGCTGC GCTACGGCAT CCCCGAATTC AAACTGGAAA AACGGCACCT GGAGCGGCGG
CTCGCCCAGA TGCGCGCCGA AGGCACCGAG TTCCGCACCG GCGTCAACGT CGGCGTGGAC
CTCACCGCCG ACCAGCTGCG CGCCGACCAC GACGCCGTCA TCCTCGCCGG AGGCGCCACC
GTGTGGCGGG ACCTGCCCAT CCCGGGCCGC CACCTCGCCG GCGTCCACCA GGCCATGGAA
TACCTGCCGC TCGCCAACCG GGTCCAGGAA GGCGACTTCG CTACTCCGCC CATCACCGCG
GAAGGCAAGC ACGTCGTCGT CATCGGCGGC GGCGACACCG GCGCCGACTG TGTCGGCACC
GCCCACCGCC AAGGGGCGCG CTCCGTCACC CAACTGGAGA TCATGCCGAA GCCGCCGACC
ACGCGGCCCC CGCACCAGCC GTGGCCGACC ATGCCCCTGC TCTACAAGGT CACCAGTGCG
CACGAGGAGG GAGGCGAACG TCTCTACTCG GTCAACACCC TGGAGTTCCT CGACGACGGA
ACAGGCGCGG TGCGTGGCCT CAAAGTCGTC GACGTCACCC GCACCGCGGA GGGGTTCGCA
CCGGTGCCCG GCACGGAACG CGAAATCCCC GCCCAGCTCG TCGTCCTCGC CCTGGGCTTC
CTCGGCCCGC AGCGGGAAGG GCTCCTGGAG CAGCTCGGCG TGGCGCTCGA CGAACGCGGC
AACGTGCAGC GCGGACCCGA CTACGCCACC AGCGTGCCAG GAGTGTTCTG CGCGGGAGAC
ATGGGCCGCG GGCAGTCCCT CATCGTGTGG GCGATCGCGG AAGGGCGCAG CGCTGCCGCC
GCCGTCGACG CCTACCTGTG CGGGGAAACG GCCCTGCCCA CCGCGATCCC TCCGACCGCG
CGGCCGTTGA CGCTCTGA
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| Protein sequence | MADPKGFLKI TERELPSHRP VPVRIQDWRE VYEDFDRAAL IRQASRCMDC GIPFCHNGCP
LGNLIPEWND LVYRHDWRDA IERLHATNNF PEFTGRLCPA PCESACVLGI NQPAVTIKNV
EVSIIDRAWE EGWVRPQPPA QHTGKKVAVV GSGPAGLAAA QQLTRAGHTV TVYERADRIG
GLLRYGIPEF KLEKRHLERR LAQMRAEGTE FRTGVNVGVD LTADQLRADH DAVILAGGAT
VWRDLPIPGR HLAGVHQAME YLPLANRVQE GDFATPPITA EGKHVVVIGG GDTGADCVGT
AHRQGARSVT QLEIMPKPPT TRPPHQPWPT MPLLYKVTSA HEEGGERLYS VNTLEFLDDG
TGAVRGLKVV DVTRTAEGFA PVPGTEREIP AQLVVLALGF LGPQREGLLE QLGVALDERG
NVQRGPDYAT SVPGVFCAGD MGRGQSLIVW AIAEGRSAAA AVDAYLCGET ALPTAIPPTA
RPLTL
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