| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1163 |
|---|
| Symbol | |
|---|
| ID | 3580847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1354247 |
|---|
| End bp | 1354711 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637684858 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289224 |
|---|
| Protein GI | 72161567 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.567834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGC CGTCGATACC AGAGAGACGG CGCCGCCTGC ATCCTGCGGC GGCGCCGCTC
GCTCTCGGCG TTCTCGGCCT CCTCGGCGCG GTCGTCGTGC ACGTCGTCGA CCCCAACGTG
CCGGGGCGCT ATCCCGTCTG CCCGTGGCTG ACGGTCACCG GAACCTACTG CCCGGGCTGC
GGGACCACCC GGGCGCTGCA CGCGCTCACC TACTTCGACA TTGTCGGCGC CGCGCAGATG
AACCTCCTGC TGCTGGCCGT ACTGCCGTTC CTCGCGTTCG CCTACGTGCG CTGGGTGTAC
CGGTCCTTCC GCCCGCCGCC CACGCCTCCC GCACCGCCCG CGCCGCTCCA TCCGTTCTGG
ACGTGGGCCC TGCCCGGAGC CATCCTCGTC TTCTGGGTGG TGCGCAACCT CCCCTTCGCG
ACCTTCCTCG CCCCCGGCGG GGTCCCCGCG CCGATCCTGT CGTAA
|
|---|
| Protein sequence | MVEPSIPERR RRLHPAAAPL ALGVLGLLGA VVVHVVDPNV PGRYPVCPWL TVTGTYCPGC
GTTRALHALT YFDIVGAAQM NLLLLAVLPF LAFAYVRWVY RSFRPPPTPP APPAPLHPFW
TWALPGAILV FWVVRNLPFA TFLAPGGVPA PILS
|
|---|
| |