| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1155 |
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| Symbol | |
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| ID | 3581201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1345673 |
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| End bp | 1346410 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684850 |
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| Product | phosphoribosyl isomerase A |
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| Protein accession | YP_289216 |
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| Protein GI | 72161559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
[TIGR01919] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0166379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCCA TCCTTGAACT CCTTCCCGCC GTCGACGTCG CCGGCGGCCA GGCAGTCCAA
CTCGTCCAGG GCAAAGACGG AACCGGCGGC CGGTACGGCG ACCCACTCAA CGCCGCGCTG
ACCTGGCAGA ACGCCGGAGC CGAGTGGATC CACCTCGTGG ACTTGGACGC TGCGTTCGGC
CGCGGCCACA ACCGGGAACT CCTCGCCTCC ATCGTCGGCA AGCTCGACAT CAAAGTGGAA
CTGTCCGGAG GGATTCGCGA CGACGAGTCG CTGAACGCAG CCCTGGCCAC CGGCTGCCAC
CGCGTCAACA TCGGCACCGC CGCGCTGGAA AACCCCGACT GGTGCGCCAA GGTCATCGCA
GAACACGGCG ACCGGGTCGC GATCGGTCTG GACGTCCGCG GCACGACCCT GGCCGCGCGC
GGCTGGACCC GCGACGGCGG CGACCTCTAC GAGACCCTGG AACGGCTGGA AGCTGCGGGC
TGCGCCCGCT ACATCGTCAC CGACGTCAAC AAGGACGGCA CCCTCAAAGG CCCCAACCTC
GACCTGCTGC GGGACGTGTG CTCCCGCACC GACAAGCCGG TCGTCGCCAG CGGCGGTATC
TCCAGCCTCG ACGACCTGCG CGCACTGGCC GCGCTCGTGC CCGAAGGGGT GGAAGGCGCC
ATCATGGGCA CCGCCCTGTA CGAGGGCGCG TTCACCCTGG AAGAAGCCCT GGCTACCGTG
CGCGAGGTTG CCCAATGA
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| Protein sequence | MAPILELLPA VDVAGGQAVQ LVQGKDGTGG RYGDPLNAAL TWQNAGAEWI HLVDLDAAFG
RGHNRELLAS IVGKLDIKVE LSGGIRDDES LNAALATGCH RVNIGTAALE NPDWCAKVIA
EHGDRVAIGL DVRGTTLAAR GWTRDGGDLY ETLERLEAAG CARYIVTDVN KDGTLKGPNL
DLLRDVCSRT DKPVVASGGI SSLDDLRALA ALVPEGVEGA IMGTALYEGA FTLEEALATV
REVAQ
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