| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1125 |
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| Symbol | |
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| ID | 3579327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1315542 |
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| End bp | 1318949 |
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| Gene Length | 3408 bp |
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| Protein Length | 1135 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 637684820 |
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| Product | hypothetical protein |
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| Protein accession | YP_289186 |
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| Protein GI | 72161529 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0153858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCCC CTGACCGAAA GCCCCGCCAG GTCACCCCCA CCGAACTGCT CGACATCCGC
GAAGCCGAGT GGCGGCCCCG CCTGGAGTCG CGCTCCCTCG TCAGCGAGAC CGTGCTGCCC
CAGAAACACC TGGACCAGGC CGCGGTCGCG CTCGGCCGCG TCCTCACCCA GGCCCTCGAC
CGGGGACGCG AGCCCCGTCT GCTCCGCTGG CCCGCCTGCG TGGCCGCCGT CACCGCCGGC
ATCGCCACCG CCCGCTACTC CCAGGGCGCG TTCTGGCCCG CACTGTGGGA GACCGCCCGC
GTGCCCGCCG CCCGGCAGGA CGCCGACACC TGGGGGAAGG CGTTCCTGGG CGCCCTGGAC
CGGCTGGGCC TGGACCCCTT CCCCGACGAG CACTTCCCCT ACGTCACGCC GATCCTCATG
CACGCGGGCA TCCCCACCTA CTGCCTGGGC GACGTGTTCA CCCTGCTGCT GGAACGCAGC
GTGCGCACCC CCGGCCTGGA CGCCCCCGCC TTCCACCACT GGGCCGTGTC CGGACGGCAC
CGCCTCAACA GCCTCGACGT GCCCGCGCGG CGGTTCATCA CCGAGGGCGG CGACTACGCC
CTGGAGGTCG TCGACCGCTG CCTGGACCTG CTCGACCGGC TCCGTGACGA CCCCGACGCC
GACTGCCGGT CCGTGGGCCT GCCGCCGCGC TTCCTCGCCC CCGCCCGCGA GGCCCTGGAA
CGGGCCGCCG CGTCGGGGAC CCCGGTCGCG CGCCCCGCCA CCGGCGGCCC CCGGCGGCAG
CAGGGCGCCC GGCCCCGGCT GCGCCTCGAC CCCTACGCGC ACGGCGTGCA CGTCGCGCTG
CCCGTCATCG GCGACAGCGA CGACCACATC GTGCGCTGGC GCATCACCAC CGACAGCGGC
ACGTACCAGG TGCGCGGCCA CGGCCGGTGG GCCGCCGCCG CGGGCACCGC CTCCCCCACC
CTGTTCCCGC TGCCCGCCCC CAGCCGCACC GTCCGCGTGG AACTCGGCGA CACCGGCTTC
ACCGAACACC TGCCGCTGGT CGACCCCGAG GACCCGCTGC TCGTCTTCAC CGACGACGGC
GACCCGCTCG ACCCCCGGCT CGCGCTGCCG CCCGGCCGCC TGTGGCTGCT GCACCCCGCC
GACCGGGCCC TGCTGCGCTC CGGCGGCGAC ACCGGCGACG ACCTGGTCGG CGACACCCCC
TACGGCTGGG AGGGGTGGAC ACTGCTGCGG GTGACCCTGC GCCGCGGCGA CCGGATCGGC
CTGGAGGGCT GCCCCGAGCG CCTCGTGCAC GGCCGCGCCC GCCCCCACCT CGACCAGTCC
GCTCCCGTGC GGGGCGTGTC GACCACGTCC GGCTCCCCCG TCCACGCCGA CCTGCCCGTG
GTGGTGCTGC CCGACGCCGA GGGCGAGGCC GTGGACTGGC ACATCGACGT GCTGCACGCC
GACACCGGAC GGCTGCTGGC CGGCGCCACC GGCCGCAGCG GGCAGCGCGT CAGCCCGCTG
GAGGGCCTGC CCCGCCCCGT GCTCGGCTCG TTCCTGGTCA CCGTGCGCGG CCCTCTCGGC
CGCGGCCTGC GCCGCCACCT CACCGTCGCC GAAGGGCTCA CCGCCCGCTA CGAGCCCGCC
TTCCGGGCGC TCACCCCCAC CGGGCTGGAA CCGGTGGACG CCGTCCTGGC CGGACCCGAC
GGGCTGGACG TCGAACCGGA GGCGCAGCGG CTCGGCTCCG GCGAGGCGAC GCTCGCGGCG
CGGCTGCGCA CCGCCGCCGC CGAACTGGCC GTCACCGTCC GCCCGCCGCA CCTGGCCGTA
CTGTGCACCG GCGACCCCAG CCCCCAGTGG CGGCCCCAGC CGCTGCGGCT GGCCACCGAG
ACCGTGACCG GGGTCGGCGA CCTGCTGCTG CGCCTCCCCG AAGGCGAGGA GGACAGCGGG
CTGCCCGGGC CGCTGTCGGT GATCTCCGGT GAGGACGTGG TGCAGCGGGT GGAACCCGCG
GCGCACCGGG GCGGCGCCAC CGTCCGCTAC CCGATCGCCC AGATCGGCGA CACCGCCGCC
GCCCACCGGC ACCTGCGGAT CGCCGCCCCC TACCGGGACC GGGTCCTGCA CGTCGCCGTG
GTCAGCCCGC GCCGCCTGGC CACCGGGGCG CACCAGGAGG ACGGCGCCGT CGTCCTGGCG
GACTTCCCCG GCATGCCCGG GGTCGATGCC GCCCTCTACC CGCACCGCGC GCCGTGGCGG
CCGCCCCGGG TGGTGCCGGT GTCCAAGGAC GGCCGCATCG CCCTGCCCGA GGACCTGCGC
GACGGCGGCC CGCTGGAGGT GCTGCTGGCC GTGGACGACC CGTGGTCGGC GGCGGAGTGG
CCCGACTGGC CCGACCGGCG CGACGCCAAC CGGCTCACCT GCCCCGCGCC CGGCGTCCCC
GACTCCGACG ACCCCGAGGA GGTGCTGCTC TCCCGGGTCC TCGCCGGGGA GGCCGACGCC
GACCGGCTGC GCGGCACCGA CGAGACCGCC GCCCGGCTGT GGCGGGTCGT GGGCCTGGCC
GACCGGCTCG TCTCCGTCGG CGTGGACCGC GCCGCCGTCG ACGCCTGTGC CCGCGCCCTC
GGCGCACACC CCGTCACCGC GCTGCTCGCC CACGGCTCCG CCGGACTGGA CCCCGCCGAC
AGCGTCCGCA CCCTCATCGC CAGCGGCCTG GCCGCCGCAC CCCAGCACGA CCGGGTCACC
GTGGACGAGG CGGTCCGGCT GTGGCAGCGG CTGCCCGCCG CGGCCGCCCT GGCCACCAGC
GACCTGCTGC CCCGCATCCC CACCGACCCC GCCCGGCAGC GGCCCGAGCA CGCCGAACTG
CTGGAGGAGC TGGAGCACAG CTGCGGGCCC GCCGCCGCGC AACTGCTGGC CGGCGACGCC
GACCCGCACG CCCGCGTCGG CCGCTTCGAC GCCTCCGCCG AACACCTCGC CCGCATGCCC
GAGGCTCAGG TCAGGGCCGC GTGGCGGGCC GCCGGAGTGG TGCCCCGGGC GCTGCTGGAC
GCCGACAACC GCTCCCAGGC CGCCCTCGCC CTGTTCGGGG TGCGCAACAG CACCGCGCTG
CACAGGGTGC GCTCCCGGGC GGCCACCGTC CTGAAGCTGA CCGCCGCGGT GTGCGACCGG
CTCCCCGACG CTTACCGGAC AGCGGCACGC GCCCTGATCG ACAGCCGCCG CCCCGACCGG
CCCGGGTCCT GGCGCGACCT GCCCGCCCTG TCCGCCGCGC TGGCCACCGC CGCCCGCCTG
GCCGCCCGGG ACGTGGACGA CTGCCGACGG CTGGTGGAGC GCTACCGGCA GGAGTGGGCG
GAACTGGCCG CCGCGGCCCC CGACCTCGCC GCCGTCGACC TCGTCCTCGC CGAACTCACC
CTCGCCGGAA CCGAACGCGC CCGACTGTTC AAGGAGCCGA CCGCGTGA
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| Protein sequence | MPSPDRKPRQ VTPTELLDIR EAEWRPRLES RSLVSETVLP QKHLDQAAVA LGRVLTQALD
RGREPRLLRW PACVAAVTAG IATARYSQGA FWPALWETAR VPAARQDADT WGKAFLGALD
RLGLDPFPDE HFPYVTPILM HAGIPTYCLG DVFTLLLERS VRTPGLDAPA FHHWAVSGRH
RLNSLDVPAR RFITEGGDYA LEVVDRCLDL LDRLRDDPDA DCRSVGLPPR FLAPAREALE
RAAASGTPVA RPATGGPRRQ QGARPRLRLD PYAHGVHVAL PVIGDSDDHI VRWRITTDSG
TYQVRGHGRW AAAAGTASPT LFPLPAPSRT VRVELGDTGF TEHLPLVDPE DPLLVFTDDG
DPLDPRLALP PGRLWLLHPA DRALLRSGGD TGDDLVGDTP YGWEGWTLLR VTLRRGDRIG
LEGCPERLVH GRARPHLDQS APVRGVSTTS GSPVHADLPV VVLPDAEGEA VDWHIDVLHA
DTGRLLAGAT GRSGQRVSPL EGLPRPVLGS FLVTVRGPLG RGLRRHLTVA EGLTARYEPA
FRALTPTGLE PVDAVLAGPD GLDVEPEAQR LGSGEATLAA RLRTAAAELA VTVRPPHLAV
LCTGDPSPQW RPQPLRLATE TVTGVGDLLL RLPEGEEDSG LPGPLSVISG EDVVQRVEPA
AHRGGATVRY PIAQIGDTAA AHRHLRIAAP YRDRVLHVAV VSPRRLATGA HQEDGAVVLA
DFPGMPGVDA ALYPHRAPWR PPRVVPVSKD GRIALPEDLR DGGPLEVLLA VDDPWSAAEW
PDWPDRRDAN RLTCPAPGVP DSDDPEEVLL SRVLAGEADA DRLRGTDETA ARLWRVVGLA
DRLVSVGVDR AAVDACARAL GAHPVTALLA HGSAGLDPAD SVRTLIASGL AAAPQHDRVT
VDEAVRLWQR LPAAAALATS DLLPRIPTDP ARQRPEHAEL LEELEHSCGP AAAQLLAGDA
DPHARVGRFD ASAEHLARMP EAQVRAAWRA AGVVPRALLD ADNRSQAALA LFGVRNSTAL
HRVRSRAATV LKLTAAVCDR LPDAYRTAAR ALIDSRRPDR PGSWRDLPAL SAALATAARL
AARDVDDCRR LVERYRQEWA ELAAAAPDLA AVDLVLAELT LAGTERARLF KEPTA
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