| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1057 |
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| Symbol | |
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| ID | 3579609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1234769 |
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| End bp | 1238080 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684752 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_289118 |
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| Protein GI | 72161461 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.614826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCC GTACTGATCT TTCGTCTGTG CTCGTGATCG GCTCCGGGCC GATCGTCATC
GGCCAGGCGT GCGAATTCGA CTACTCGGGC ACTCAGGCGT GCCGGGTGCT CAAAGCCGAA
GGGCTGCGGG TGATCCTGGT CAACTCCAAC CCGGCCACGA TCATGACCGA CCCCGAATTC
GCGGACGCCA CCTACGTGGA ACCCATCACC CCGGAGATGG TCGAGAAGAT CATCGCCAAG
GAGCGTCCCG ATGCGCTGCT GCCCACCCTG GGCGGCCAGA CCGCGCTCAA CACCGCGGTG
GCGCTGCACG AGGCCGGGGT GCTCGACAAG TACGGGGTCG AACTGATCGG CGCCAACATC
GACGCCATCC AGGCCGGGGA AGACCGCGAC AGCTTCAAAC GCGTCGTGGA GCGGGTCGGT
GGCGAGTCGG CCCGCTCGGT GATCTGCCAC TCCATCGAAG AGTGCCTGGC CGCCGCCGAA
GAACTGAACT ATCCGGTCGT GGTCCGCCCC TCCTTCACCC TGGGCGGCGC CGGCTCCGGG
TTCGCCCACA ACGAGGAGGA GCTGCGCCGC ATCGCGGGGC AAGGGCTCGC GCTCTCCCCG
ACCACCGAGG TGCTCCTTGA GGAGTCCATC CTCGGCTGGA AGGAATACGA GCTGGAGCTG
ATGCGCGACG CCAACGACAA CGTGATCGTC GTCTGCTCCA TCGAGAACCT CGACCCCATG
GGCGTGCACA CCGGCGACTC CATCACGGTC GCCCCCGCGA TGACGCTCAC CGACCGCGAA
TACCAGCGGC TGCGCGACCT GGGGATCGCC ATCATCCGCG AAGTCGGGGT CGACACCGGC
GGCTGCAACA TCCAGTTCGC GGTCCACCCC GAGACCGGGC GGACCATCGT CATCGAGATG
AACCCGCGCG TCTCCCGGTC CTCGGCGCTG GCGTCCAAAG CCACCGGGTT CCCCATCGCG
AAGATCGCGG CCAAGCTCGC CGTCGGCTAC ACCCTCGACG AGATCACCAA CGACATCACC
GCCAAGACGC TGGCCAGCTT CGAGCCGACC CTGGACTACG TCGTCGTCAA AGTGCCGCGG
TTCGCGTTCG AGAAGTTCCC CGGCGCCGAC TCCGGCCTGA CCACCACCAT GAAGTCGGTC
GGCGAAGTCA TGGCGATCGG CCGGTCCTTC CCCGAAGCGC TGCAGAAGGC CATGCGGTCG
CTGGAGAAGA AAGGCAGCTC CTTCACCTGG ACAGGAGACC CCGGGGACAA AGAGGAGCTG
CTGCGGGCGG TCCGGACCCC CAGCGAACAC CGGCTGCGCC AAGTCCAGCA GGCCCTGCGG
GCCGGGGCCA CGGTCGCGGA ACTCCACGAG GCCACCAAGA TCGACCCGTG GTTCCTCGAC
CAGATCCTCC GGTTGGACGA GAAGGCCCGC GAACTCGCCG CCGCGCCCCG CCTCGACGCG
GACCTGCTGC GCTCCGCCAA ACAGCTCGGC TTCTCCGACG CGCAGATCGG CGAGATCACC
GGCCGCTCCG AAGAAGTCGT GCGGGAGCTG CGCGACGCCC TCGACGTGCA CCCGGTCTAC
CTGGCCGTGG ACACCTGCGC CGCCGAGTTC CCCGCGACCA CGCCCTACCT GTACTCCAGC
TACGACGAGG AGACCGAGGT CCCGCCCAGC AGCAAGCCCA AGGTCATCAT CCTCGGCTCC
GGACCCAACC GGATCGGCCA GGGCGTGGAG TTCGACTACA GCTGCGTCCA CGCGTCCTTC
GCCCTGTCGG AGGCCGGCTA CGAGACCGTC ATGGTCAACT GCAACCCTGA GACGGTCTCC
ACCGACTACG ACACCAGCGA CCGGCTGTAC TTCGAGCCGC TGACCCTGGA AGACGTGCTC
GAAGTGGTGC GCGCCGAACA GCAGACCGGC GAAGTCGTCG GCGTGATCGT GCAACTGGGC
GGCCAGACCC CGCTCGGCCT GGCCAAGAAG CTCAAAGAAG CCGGGGTGCC GATCGTGGGC
ACCAGCCCCG AGGCGATCGA CCTGGCCGAA GACCGCGGCG AGTTCGGCCG GGTCCTGGCC
AAAGCCGGGC TGCCCGCCCC CAAGCACGGC ACCGCCCAGT CCTTCGACGA AGCCCGGGCC
ATCGCCGAAG AGATCGGCTA CCCGGTGCTG GTTCGCCCCT CCTACGTGCT CGGCGGCCGC
GGCATGGAGA TCGTCTACAA CGAGGCCATG CTCGCCGACT ACATCGAGCG CAACGCGGAA
GTCAGTGCCG AACACCCGGT GCTGGTGGAC CGCTTCCTCG ACGAAGCCAT CGAGATCGAC
GTGGACGCCC TCTACGACGG CACCGAACTG TACCTGGGCG GTGTCATGGA GCACATCGAG
GAGGCGGGCA TCCACTCCGG CGACTCCGCC TGCGCTCTGC CCGCGATCAC CCTGGGCCAG
GAGGACATTG AACGCATCCG CTACTCCACG GAGGCCATCG CCGCCGGGGT GGGGGTGCGC
GGCCTGATCA ACGTGCAGTA CGCGCTCTCC GCCGGCGAAC TCTACGTGCT CGAAGCCAAC
CCGCGGGCGT CGCGCACCGT GCCGTTCGTG TCCAAGGCCA CCGCGGTCCC CCTGGCCAAG
GCTGCAGCCC GGATCATGCT GGGGGCGACC ATCCAGGAGC TGCGCGACGA GGGCCTGCTG
CCGCGGCACG GCGACGGCGG CACTCTGCCC CCGGACGCAC CGGTCGCCGT CAAGGAAGCG
GTCCTGCCGT TCAACCGCTT CATTGACCGC CACGGCCAGG GCGTGGACAC CGTCCTGGGC
CCGGAGATGC GCTCCACCGG TGAAGTCATG GGCTTGGACG TGGACTTCGG CACCGCGTTC
GCCAAGTCCC AACTGGCCAC CTACGGCACG TTCCCCACGT CGGGAACCGT GTTCGTCTCC
GTGGCCAACC GCGACAAGCG CACCATGATC TTCCCGGTCC GGCGGCTGGC CGACCTCGGG
TTCGAGATCC TGGCCACGGA AGGCACCGCG CTGGCGCTGC GCCGCCACGG GGTGCAGGCC
CGCGTGGTGC GCAAGCACAG CGAAGGGCCT GGACCGGACG GGGAGCCGAC CATTGTGCAG
CGCATCCACA ACGGTGAAGT GGATCTCATC GTCAACACGC CGTTCGGCGG CCCCGGCCAG
TCCGGACCGC GCCTGGACGG CTACGAGATC CGCACCGCCG CAGTGGCGCG CGGCGTGCCC
AGCGTGACCA CGGTCCAAGG CCTGGCCGCC GCCGTGCAAG CCATCGAGTC GCTGGTCAAC
GGCAGGATCC AGGTGCGTTC GCTCCAGGAG CACGCCCAGC GGCTGCGCGA CGCATCGCAG
GCGACCGCGT AG
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| Protein sequence | MPRRTDLSSV LVIGSGPIVI GQACEFDYSG TQACRVLKAE GLRVILVNSN PATIMTDPEF
ADATYVEPIT PEMVEKIIAK ERPDALLPTL GGQTALNTAV ALHEAGVLDK YGVELIGANI
DAIQAGEDRD SFKRVVERVG GESARSVICH SIEECLAAAE ELNYPVVVRP SFTLGGAGSG
FAHNEEELRR IAGQGLALSP TTEVLLEESI LGWKEYELEL MRDANDNVIV VCSIENLDPM
GVHTGDSITV APAMTLTDRE YQRLRDLGIA IIREVGVDTG GCNIQFAVHP ETGRTIVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEITNDIT AKTLASFEPT LDYVVVKVPR
FAFEKFPGAD SGLTTTMKSV GEVMAIGRSF PEALQKAMRS LEKKGSSFTW TGDPGDKEEL
LRAVRTPSEH RLRQVQQALR AGATVAELHE ATKIDPWFLD QILRLDEKAR ELAAAPRLDA
DLLRSAKQLG FSDAQIGEIT GRSEEVVREL RDALDVHPVY LAVDTCAAEF PATTPYLYSS
YDEETEVPPS SKPKVIILGS GPNRIGQGVE FDYSCVHASF ALSEAGYETV MVNCNPETVS
TDYDTSDRLY FEPLTLEDVL EVVRAEQQTG EVVGVIVQLG GQTPLGLAKK LKEAGVPIVG
TSPEAIDLAE DRGEFGRVLA KAGLPAPKHG TAQSFDEARA IAEEIGYPVL VRPSYVLGGR
GMEIVYNEAM LADYIERNAE VSAEHPVLVD RFLDEAIEID VDALYDGTEL YLGGVMEHIE
EAGIHSGDSA CALPAITLGQ EDIERIRYST EAIAAGVGVR GLINVQYALS AGELYVLEAN
PRASRTVPFV SKATAVPLAK AAARIMLGAT IQELRDEGLL PRHGDGGTLP PDAPVAVKEA
VLPFNRFIDR HGQGVDTVLG PEMRSTGEVM GLDVDFGTAF AKSQLATYGT FPTSGTVFVS
VANRDKRTMI FPVRRLADLG FEILATEGTA LALRRHGVQA RVVRKHSEGP GPDGEPTIVQ
RIHNGEVDLI VNTPFGGPGQ SGPRLDGYEI RTAAVARGVP SVTTVQGLAA AVQAIESLVN
GRIQVRSLQE HAQRLRDASQ ATA
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