Gene Tfu_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0990 
Symbol 
ID3579003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1161917 
End bp1162645 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID637684685 
Productputative integral membrane protein 
Protein accessionYP_289051 
Protein GI72161394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0153454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGA AGCCCAAGGA CTCCAAGACC GCCCCGGCCG GTACGGCTCA GGGTGCCGCC 
GCGAAACAGC CCGGCAGGCT CAAACAGTTC GGCATGGTCG CCAAGATCGT GCACCAGCAC 
AGTCCGAAGA GCATCCCGAT CGCACTCGGG GTGATGGTGG CTGTTCTGGC CGTGGCGATC 
CTGGTTGCCG TCCTCACGGG CTCCTGGCTG TATCCGCTTG TGCTCGGTAT CCCGTTGGCG 
CTGCTTGCCG GTCTCATCAC GTTCTCGCAG AGCGCGCAGA GGGTGCAGTA CAAGCTGCTG 
GACGGGCAGT TGGGCGCCGG ATTGGCGATT CTGCAGAGTC TGCGCGGCAA CTGGACGGTG 
GACGCCGGGG TGAACGCCAA CCGGAACATG GACGTGGTGC ACCGGGCGGT GGGTCCCCCC 
GGGGTGGTGC TGGTCGGCGA GGGCGACCCG AACCGGTTGA AGTCGCTGAT CGCCGCGGAG 
CGCAAGCGGG TGATGCGGGT GGCCTACGAC ACGCCGATCT ACGACATGAC GGTCGGCAAC 
GGTGAGGGCC AGGTCAAGGT TGCTGAGCTG CGCAAGCGGA TCCTCAAGCT GCCGCCGAGC 
ATGAACAAGC CGCAGTTGTC GGAGCTGCGC TACCGGTTGA AGGCGCTGCC TCCGGCGATG 
CAGGCCCCGC GCGGCCCGAT CCCTAAGGGG GTCAAGATGC CGAAGATGCC GCGCCCCCGG 
CCGCGTTGA
 
Protein sequence
MAKKPKDSKT APAGTAQGAA AKQPGRLKQF GMVAKIVHQH SPKSIPIALG VMVAVLAVAI 
LVAVLTGSWL YPLVLGIPLA LLAGLITFSQ SAQRVQYKLL DGQLGAGLAI LQSLRGNWTV 
DAGVNANRNM DVVHRAVGPP GVVLVGEGDP NRLKSLIAAE RKRVMRVAYD TPIYDMTVGN 
GEGQVKVAEL RKRILKLPPS MNKPQLSELR YRLKALPPAM QAPRGPIPKG VKMPKMPRPR 
PR