| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0916 |
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| Symbol | |
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| ID | 3579216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1079776 |
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| End bp | 1080342 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637684611 |
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| Product | putative secreted protein |
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| Protein accession | YP_288977 |
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| Protein GI | 72161320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.998693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCCGCCC AGCAGCGAAG TAGCGTCGGC GTCCTGCTGG CCGTCCTCCT CGGCGTGGCA
GCCGCGTTCG CCAGCGGCGG TCCCGCCACC CCGGAAACAC CACTGAAGCG GTCAGTTCCT
GTCCGGTTGA CCATCGAGTC GATCGGGGTG GACGCGCCCG TCGCCGAACT GGGGCTCAAC
CCCGACGGCA CGCTGGAAGA CCCGCCGCTG GACGACCCCA ACCTGGTCGG CTGGTACGCG
CTCGGTGCCT CCCCGGGCGA AGCCGGGCCC GCCGTGCTCA CCGGGCACCT CGACACCCGG
AGCGGGCCGT CGGTCTTCGC CCGCCTCAAC GAACTACGTC CCGACGACCT CGTCCACGTG
GCGCGCGCCG ACGGCTCCCA GCCCGTGTTC GTGGTGGACC GGGTCGAACA GGTGCCCAAG
GAAGACTTCC CCACCGACCA GGTCTACGGG CCGAGCGACC GCCCGGAGCT GCGCCTGGTG
ACCTGCGCCG GGGACTTCGA CCCGGCTAGC GGCCACTACT CCGACTCCCT CGTGGTGTAC
GCCGTCCTCG CCGAGTCCGG CGGGTGA
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| Protein sequence | MAAQQRSSVG VLLAVLLGVA AAFASGGPAT PETPLKRSVP VRLTIESIGV DAPVAELGLN
PDGTLEDPPL DDPNLVGWYA LGASPGEAGP AVLTGHLDTR SGPSVFARLN ELRPDDLVHV
ARADGSQPVF VVDRVEQVPK EDFPTDQVYG PSDRPELRLV TCAGDFDPAS GHYSDSLVVY
AVLAESGG
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