Gene Tfu_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0913 
Symbol 
ID3579213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1074980 
End bp1075930 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content65% 
IMG OID637684608 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein 
Protein accessionYP_288974 
Protein GI72161317 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTCG AAGTCTCGGA CCTGCGGGTC TACTATCGCA CCTTGCGTGG TGACGTCCGC 
GCTCTCGACG GTCCCACGTT CACTGTCGCC GACGGCGAGA TCATGGGACT GGCGGGAGAG 
TCAGGCAGCG GCAAGTCCAC ACTCAGCAAG AGCCTGATCC GGCTGGACGG GCGGATGCGC 
TACATCGGCG GCAGCGTCAC CCTCGACGGC GACGAGATGC CGATCTGGGA TGACCGGGCC 
ATGGACGAGT TCCGCTACAA GCGGGTCTCG ATCATCCCGC AGTACGCGAT GAGCGCGATG 
AACCCGACCC GCAAGATCGG CAAGATGATC GCCGAGCTGC TGGAGTCGCG GGGGGTGCGG 
TTCCGGGACG TCCGCGACGA GCTGCACCGC CGTCTGGAGC TGGTGGAGCT GGAGCGGGAC 
GTGCTGGACC GCTACCCGCT GGAGCTGTCG GGTGGGATGA AGCAGCGCAC GGTCATGGTG 
ATCTCGACGC TGCTCAACCC GTCGCTGCTG ATCGCCGACG AGGTGACGTC GGCGCTGGAC 
GTCTCCACCC AGCGGGCTGT CGCTGAAACC CTGGTGGAGT TCCGCGACCG CGAGTTCGTC 
AAGAGCATGA TCGTCGTGAC GCACGACATC TCGCTGGTGT ACCAGATCGC GGACACCATC 
ATGGTGATGT ACAGCGGACG GCTTGCGGAG AAGGCGTCCG CCAAGACCAT CATCGAGATG 
CCCAAGCATC CTTACACCAA GATGCTGCTG GACTCGCTTC CCGAGGTGGG CGTCAAGTAC 
GAGGACAAGC GGTTGAGCGG TATTCCGGGG AGCCCGCCCG GTCTCCTCAA TCCCCCGCAG 
GGGTGTCGCT TCCGGGATCG CTGCCCGCTG GCCGACAAGC AGTGTCTGGA GCAGCCGCCG 
TTCGTGGAAG TGGAAAGCGA CCACCACGTC GCCTGTTGGA AGGCCGAGTG A
 
Protein sequence
MTLEVSDLRV YYRTLRGDVR ALDGPTFTVA DGEIMGLAGE SGSGKSTLSK SLIRLDGRMR 
YIGGSVTLDG DEMPIWDDRA MDEFRYKRVS IIPQYAMSAM NPTRKIGKMI AELLESRGVR 
FRDVRDELHR RLELVELERD VLDRYPLELS GGMKQRTVMV ISTLLNPSLL IADEVTSALD 
VSTQRAVAET LVEFRDREFV KSMIVVTHDI SLVYQIADTI MVMYSGRLAE KASAKTIIEM 
PKHPYTKMLL DSLPEVGVKY EDKRLSGIPG SPPGLLNPPQ GCRFRDRCPL ADKQCLEQPP 
FVEVESDHHV ACWKAE