| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0819 |
|---|
| Symbol | |
|---|
| ID | 3579698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 968474 |
|---|
| End bp | 970072 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637684512 |
|---|
| Product | malate synthase |
|---|
| Protein accession | YP_288880 |
|---|
| Protein GI | 72161223 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2225] Malate synthase |
|---|
| TIGRFAM ID | [TIGR01344] malate synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACTC CCCACGGAGT CGAGATCACC GGTCCGATGA AGGACAGGTA CGACGAGATC
CTGACCACGG AAGCGCTCGA ATTCCTCGCT GACCTGCACC GCCGGTTCGA GCCGCGCCGT
CAGGAGCTCC TTGCCGCACG CAAGCGCCGT CAGGAAGAGA TCTCCGCGGG CGCCAACCTG
GACTTCCTGC CGGAGACCAA GGCCATCCGC GAAGATCCGG ACTGGCGCGT CGCCCCGCCT
GCCCCGGGGC TGGTCGACCG CCGTGTCGAG ATCACTGGCC CCACCGACCG CAAGATGACC
ATCAACGCGC TCAACTCGGG TGCGAAAGTG TGGCTGGCCG ACTTTGAAGA CGCCAACACC
CCCCTATGGG AGAACATGAT CGAAGGCCAG CTCAACCTGC GGGACGCCCT CGACCGCACC
ATCGACTTCA CCAGCCCGGA AGGCAAGCGC TACGCGCTCA AGGACGACTC CGAGCTGGCC
ACCATCGTGG TCCGCCCGCG CGGCTGGCAC CTGGACGAGA AGCACATCCT CGTCGACGGA
CAGCGCACCT CCGGCGGCAT CGTCGACTTC GCGCTGTACT TCTTCCACTG CGCCCGCCGC
CAGATCGCCA AGGGCAAAGG CCCCTACTTC TACCTGCCGA AGATGCAGAG CCACCTGGAA
GCCCGGCTGT GGAACGACAT CTTCATCCGG GCCCAGGAGG CGCTGGGCAT CGAACGGGGC
ACCATCCGCG CCACCGTGCT CATCGAGACC ATCCCCGCCG CCTTCGAAAT GGAGGAGATC
CTCTACGAGC TGCGGGAGCA CTCCGCAGGG CTCAATGCCG GCCGGTGGGA CTACCTGTTC
AGCATCATCA AGACGCACCG CACGCGCGGC CGCCAGTTCC TCATGCCTGA GCGCAACGCG
GTGACCATGA CCGCGCCGTT CATGCGCGCC TACACCGAGC TGCTGGTCAA GACCTGCCAC
AAGCGCGGCG CGCATGCTAT CGGCGGCATG TCCGCGTTCA TCCCCAACCG GCGCGACCCC
GAGATCAACA AGGTGGCGTT GGCCAAGGTC CGTGACGACA AGACCCGCGA AGCCAACGAC
GGCTTCGACG GCTCGTGGGT GGCCCACCCC GACCTGGTCC CCGTCGCTAT GGAGGTCTTC
GACGGTGTGC TGGGCGACCG CCCCAACCAG ATCGACCGGC AGCGCGACGA CGTGTCGGTG
ACCGCCGCTG ACCTGCTGGA CATCTCCAGC GCCGAAGGCG GCATCACCGA GGCGGGCCTG
CGCAACAACA TCAACGTCGC CATCCAGTAC CTGGCCGCGT GGCTGGGCGG CAGCGGCGCG
GTGGCCATCC ACAACCTGAT GGAGGACGCC GCGACCGCGG AGATCTCCCG CTCCCAGATC
TGGCAGTGGC TCCACAACGA CGTCACCTTG GACGACGGCG CCAAGGTCAC CACCGAGCTC
GTGGAGCGCC TCATCTCCGA GGAGCTGGCG ACGATCCGCG AGACCACGTC CCTCGACGCC
GACCTGCTGG ACCGCGCCAC TGCGCTGTTC AAGGAGGTCG CCCTGGCCGA GGACTACGCG
GAGTTCCTCA CGCTTCCGGC CTACGAGCGG ATGCCGTAA
|
|---|
| Protein sequence | MGTPHGVEIT GPMKDRYDEI LTTEALEFLA DLHRRFEPRR QELLAARKRR QEEISAGANL
DFLPETKAIR EDPDWRVAPP APGLVDRRVE ITGPTDRKMT INALNSGAKV WLADFEDANT
PLWENMIEGQ LNLRDALDRT IDFTSPEGKR YALKDDSELA TIVVRPRGWH LDEKHILVDG
QRTSGGIVDF ALYFFHCARR QIAKGKGPYF YLPKMQSHLE ARLWNDIFIR AQEALGIERG
TIRATVLIET IPAAFEMEEI LYELREHSAG LNAGRWDYLF SIIKTHRTRG RQFLMPERNA
VTMTAPFMRA YTELLVKTCH KRGAHAIGGM SAFIPNRRDP EINKVALAKV RDDKTREAND
GFDGSWVAHP DLVPVAMEVF DGVLGDRPNQ IDRQRDDVSV TAADLLDISS AEGGITEAGL
RNNINVAIQY LAAWLGGSGA VAIHNLMEDA ATAEISRSQI WQWLHNDVTL DDGAKVTTEL
VERLISEELA TIRETTSLDA DLLDRATALF KEVALAEDYA EFLTLPAYER MP
|
|---|
| |