| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0812 |
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| Symbol | |
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| ID | 3579691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 959602 |
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| End bp | 960231 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637684505 |
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| Product | peptide ABC transporter ATPase |
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| Protein accession | YP_288873 |
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| Protein GI | 72161216 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.3924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCG TCAAAAACCT CACCAAGTCC TTCGGCACAC GCACCCTCTG GCGCAACCTC
AACCTCACCG TCCCCGCAGG ACGGATGCTC GCCCTCGTCG GCGCCAGCGG GTCAGGAAAA
ACCACGCTGC TCAACTGCAT CGGCCTCCTC GAACGGCCGA GCAGCGGCCA CATCCTGTTC
GACAACACCG ACCTGACCCG GCTCGGCCCC GGCGGACGAC GCCGATTCCG CCGCGACAAA
CTCGGCTACC TCTTCCAGGA CTACGCGCTC ATCGACAACG CCACCGTCAA AGCCAACCTT
GATGTTGCTC GCAGACGCGG CACCCGCCCC GACTACGCGC GCATCCTCGA ACGCGTCGGC
CTCGCAGGAC GCGAAAACGA GAAAGTGCAC TACCTATCCG GTGGAGAACA GCAGCGCGTC
GCTCTCGCCC GACTCATGGT CAAACAGCCC ACCCTGGTGC TAGCCGACGA ACCCACCGGG
GCCCTAGACA GCGCCAACAG CGCAATGGTG GTGAACGTGC TCCGTGAGAT GAGCGAACAA
GGCTGCGCGG TCGTCATCGC CACCCACAAC GACGGTGTGC GCGACGCCTG CGACCTCGTC
TTCGACGTCC ACGAACAGCG GGAACTGTGA
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| Protein sequence | MITVKNLTKS FGTRTLWRNL NLTVPAGRML ALVGASGSGK TTLLNCIGLL ERPSSGHILF
DNTDLTRLGP GGRRRFRRDK LGYLFQDYAL IDNATVKANL DVARRRGTRP DYARILERVG
LAGRENEKVH YLSGGEQQRV ALARLMVKQP TLVLADEPTG ALDSANSAMV VNVLREMSEQ
GCAVVIATHN DGVRDACDLV FDVHEQREL
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