| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0406 |
|---|
| Symbol | |
|---|
| ID | 3580005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 456285 |
|---|
| End bp | 458159 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637684092 |
|---|
| Product | tyrosine protein kinase:Serine/threonine protein kinase |
|---|
| Protein accession | YP_288467 |
|---|
| Protein GI | 72160810 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTCGG ATGGGCTCCC GAAGAACTTG GAACCGCTGG CCGCCGGAGA CCCGGCGACC
ATCGGTCCTT ACGTGCTGGT CGGACGTCTA GGCAGCGGAG GCATGGGGAC GGTCTACTTG
GGCCGCGCCC CGGAGAAGGG AACCCATGTA GCGATCAAGG TCATCCGCCC CGAACTCGCT
TTCGACGAGG CCACCCGGGC GCGTTTCCGC GACGAGATGG AAAACGCCCG CAAAGTCGCC
TCCTTCTGCA CGGCTAAGGT GCTCGACCAC GGCACCTTCC AAAACCGGCC GTACATGGTC
ACCGAGTACA TTGCGGGCAC GGCCCTCGCC GAGCACATCG CCGAGCACGG TCCGCTCGAC
TCGGGCACCC TGCACGGTTT CGCATTGGGG GTGGCCGCGG CGCTCGCCGC GATCCACAAG
GCCGGTCTGG TCCACCGCGA CCTGAAACCC GCCAACGTGC TGCTGTCCCT GTCCGGGCCG
CGGGTGATCG ACTTCGGTAT CGCCCGGGCG CTGAACACGT CCACGAGCCA CACCCAGACG
GGGATCGTCA TGGGCAGCCC GGGGTGGATG GCCCCCGAGC AGTTGCTGGA AGAAAAGGTC
ACCACCAAGG CCGACATTTT CGCTTGGGGC TGCCTGGTGG CGTTCGCGGG CAACGGCCGA
CACCCGTTCG GCAACGGCGA CGCCATGACC CTCGGCAAGC GGATGCTGTT CGCAGAGCCC
GACATCGGGA ACCTGGACCC GCCGCTGGAC CGCCTCGTCG CCCGGGCGCT GGCGAAGGAC
CCCGACCAGC GTCCCACCGC CCAGGAGCTG CTGCTGGAGC TGGCAGGGGG CACGGACAGC
AACGACACCA ACGACGTGGT CAGCCATGCC CTGCACCAGT CGTGGCGGCC GAACTTCCCG
CCGATGCCCC CCGGGTATCC GCCGCCGTCC CCCCAGGCGC ACTCGGGGAT GCCCGGCCCG
CAAGCCCAGG CCCAGGCGCC GGGGCAGACC ACCATCGCCC CCCAGCCTTA CGCGCATCCC
CAGCAAGGGG GCCCGGGGCC GATGCCACCG CAAGCCGCTG GCCCCCAAGG CGGCCCGCAG
GGCGGTCCGC AAAGCCCGCC GATGCCGCAG CGGCCGGGAC CGCAAGCTTC CCACCACACC
GGCCAGATCC CCGTGGTGCC GCCCACCACT GGAAGACAGC CGCCCCGCTC CCCTGCCGCC
CAGGGCTCTT CGGGAGGCCC TCAGGCCCGC CCGTACGTGC CGCCCAACAC GCTTCCTCCA
CACCGCCCGC TCCGCCCCGA CAGCTCCCGT TCCCGGCTGC TGATCGTCTT CGCGGTGCTC
GGCGCGGTGC TTCTGGCTGT GGTCCTCGTG TTCGGCCTGG TCTTCTTCCA GGACTGGTTC
TCCTCCACTA GTGACACCAA TCCCCCCGGT CAAGGGCAGG AGCAGCAGTC GTCGGCTCCT
AAGGAAGACC CCGACGACGA GTCGGACAAG TCCGACACCC AGGCAGCGGA TCCGCAGGCG
GGGGAGAGTC TGCGCTTCGA CCTCCTCGAC TGGTACTGCG GCAACCAGGT GCTGGACCGG
CCGCTCATCG TCAACGGCGG CGAATACTGT GTCGCGGAAA TCGAGGCGCA CAATTCTGCG
AACTACCCGG TGAAGTTCCG GCACGACCTG CAGATCCTGG CGCATGCGAG CGGCGAGCAG
ACCAAGGCCG ACGCGCCGCT GCACGGGGAG GGAGCCGACC CGCTGTGGGC GGGACCGATC
CAGCCGGGCG ACACCGTGCG CGGATACCTG GTGTTCATCG TGCACTCGGA GCTGACCCCC
GAGGTCCTCA TCCTCCGCAG CACGGTGGAC AGCCCTGGCC AGCAGATCGA GATCCCCTCA
GGACAGCCCG CTTAA
|
|---|
| Protein sequence | MPSDGLPKNL EPLAAGDPAT IGPYVLVGRL GSGGMGTVYL GRAPEKGTHV AIKVIRPELA
FDEATRARFR DEMENARKVA SFCTAKVLDH GTFQNRPYMV TEYIAGTALA EHIAEHGPLD
SGTLHGFALG VAAALAAIHK AGLVHRDLKP ANVLLSLSGP RVIDFGIARA LNTSTSHTQT
GIVMGSPGWM APEQLLEEKV TTKADIFAWG CLVAFAGNGR HPFGNGDAMT LGKRMLFAEP
DIGNLDPPLD RLVARALAKD PDQRPTAQEL LLELAGGTDS NDTNDVVSHA LHQSWRPNFP
PMPPGYPPPS PQAHSGMPGP QAQAQAPGQT TIAPQPYAHP QQGGPGPMPP QAAGPQGGPQ
GGPQSPPMPQ RPGPQASHHT GQIPVVPPTT GRQPPRSPAA QGSSGGPQAR PYVPPNTLPP
HRPLRPDSSR SRLLIVFAVL GAVLLAVVLV FGLVFFQDWF SSTSDTNPPG QGQEQQSSAP
KEDPDDESDK SDTQAADPQA GESLRFDLLD WYCGNQVLDR PLIVNGGEYC VAEIEAHNSA
NYPVKFRHDL QILAHASGEQ TKADAPLHGE GADPLWAGPI QPGDTVRGYL VFIVHSELTP
EVLILRSTVD SPGQQIEIPS GQPA
|
|---|
| |