Gene Tfu_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0249 
Symbol 
ID3579847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp278761 
End bp279471 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content63% 
IMG OID637683933 
Productiron dependent repressor 
Protein accessionYP_288310 
Protein GI72160653 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.612567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGCAC AGGGACTTAT TGACACTACG GAGATGTATC TCCGTACGAT CTTCGAGCTT 
GAGGAAGAGG GGATCGTCCC GCTCCGCGCC CGTATCGCCG AGCGTCTGCG CCAGAGCGGC 
CCCACCGTGA GTCAGACGGT TGCGCGCATG GAACGCGATG GCCTGGTGCG GGTGGAGAAC 
GACCGCCACC TGGTGATGAC GGAAGAGGGA CGTCGTCTGG CCACCCAGGT CATGCGGAAG 
CACCGTCTGG CGGAACGGCT GCTGGTGGAC ATCATCGGGC TGCCGTGGGA GGACGTCCAC 
GTCGAAGCCT GCCGGTGGGA GCATGTGATC TCCGAGGCAG TGGAAGAACG GCTGATCGGA 
CTGCTCAAAG AGCCGTGGAC GTGTGCTCAC GGGAACCCGA TCCCCGGCCT GGACGAGCTG 
GGTGTCGAAG GCTACGAGCC GGAGCCGTTC GCGAGTAGCT CCATCGTGCC GATCCCCGAG 
GCGCTTTCTG ACACGCCGAC CAGGGTGACG ATTCGCCGTA TCAGCGAACA AATCCAAAGC 
GACACCAAGA CCATGCTCGC TCTTAAACGC ACCGGGGTAC AACCCGGCAA AGAAGTGACG 
CTCGAGGCGA GCGATGACGG TGTGCGAGTG ATTGGTGGTA ACGGCAAGGA TGGCGAGTCG 
ATCGAACTGC CCCGGCAGGT CGCCAGTCTT ATCTTCGTTA CCCGGGTCTG A
 
Protein sequence
MTAQGLIDTT EMYLRTIFEL EEEGIVPLRA RIAERLRQSG PTVSQTVARM ERDGLVRVEN 
DRHLVMTEEG RRLATQVMRK HRLAERLLVD IIGLPWEDVH VEACRWEHVI SEAVEERLIG 
LLKEPWTCAH GNPIPGLDEL GVEGYEPEPF ASSSIVPIPE ALSDTPTRVT IRRISEQIQS 
DTKTMLALKR TGVQPGKEVT LEASDDGVRV IGGNGKDGES IELPRQVASL IFVTRV