Gene Tfu_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0102 
Symbol 
ID3579681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp124388 
End bp125020 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID637683784 
Producttranscriptional regulator 
Protein accessionYP_288163 
Protein GI72160506 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.246242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCATCG GCGAACTGAG TCGGCGAAGC GGCGTGTCCG TGCCGACGAT CAAGTACTAC 
CTGCGAGAAA AGATGCTTCC CGAAGGCGAA CGCATCGCCG CCAACCAGGT CAGATACTCC 
GAAGAGCATC TGAGACGCCT CCGACTGATC CGCAGCCTCA TCGACGTCGG TGGACTCCCC 
GTGCCCACAG TCCGCGAAGT CCTCGCCGAA ATCGACGCAT CCCAGCCTTC GGTGCACCAC 
GCCGTCGCCC TCGCCCACCG CGGACTGCCT GTCCTCACCG GGGAGCGCAG CGACGAGCCC 
CGGGAAGAAG CCCGACGCTA CGTGGAATCA GTGTTCGCCG CCCGCGGCTG GACAGTCCCC 
GAAGACCACC CCGGTTTCAC CGCGCTCGTA GAAGCCTTGG CTCGGATGAG CCTGCTGAAT 
CAGCGCGGCT TCTTCGAGTG CGTAGGCCGC TACGCCGAAC TCGCTGAAGC GATCGCCGAG 
GTCGACATCG ACCTGATCTC CGGCCACACC GATGTGGCCG ACGTCGTCGA AAAAGCAGTG 
CTGGGCACAG TGCTTGGCGA CGTCGTCATC ACCGCGCTGC GCCGCATCGC CCAAGAACAG 
GTGTTCAACC GGCGGATGGC GCAAGGCGGC TGA
 
Protein sequence
MRIGELSRRS GVSVPTIKYY LREKMLPEGE RIAANQVRYS EEHLRRLRLI RSLIDVGGLP 
VPTVREVLAE IDASQPSVHH AVALAHRGLP VLTGERSDEP REEARRYVES VFAARGWTVP 
EDHPGFTALV EALARMSLLN QRGFFECVGR YAELAEAIAE VDIDLISGHT DVADVVEKAV 
LGTVLGDVVI TALRRIAQEQ VFNRRMAQGG