Gene Teth514_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1847 
Symbol 
ID5877876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp1865196 
End bp1865660 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content33% 
IMG OID641542198 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001663463 
Protein GI167040478 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCAGG ATTTGTACAA AGCTGCATTC TATTATTTAC TTAAATTGGG TGTACCACAG 
GCTGATGCTG AAGACATAGC CCAAGAAGCT CTGCTTTCCA CATACTTGAA TTTAGACGGC
ATTCAAGAGG GAAAATTAAA AGCTTATGTT TTGACTGCGG CGCGAAACAA ATACACTGAT
TATCTGCGCA AAACCAAAAA AGATATGACA GTTTCTATTA TAGATGTCTT TCCTCAAAGT
ACCTTTTCAG AGTTTCAACA GATTGAAAAT AAAGAAGTAA TAAAAAAAGC AGTTAATAGG
CTTACTCTCA ATGAGCAAAA GCTCTTTTAC CTTAAATTCA TATTAGAAAT GTCAAATGAA
GAAATTTCCT CTTACTTAAA AACCAATTCC AATACAGTAA AGACAATGGT ATGGAGACTA
AGAAAAAAAT TAAAAGAATA TTTAAAAGAG GAGGAGAAAA GTTAA
 
Protein sequence
MWQDLYKAAF YYLLKLGVPQ ADAEDIAQEA LLSTYLNLDG IQEGKLKAYV LTAARNKYTD 
YLRKTKKDMT VSIIDVFPQS TFSEFQQIEN KEVIKKAVNR LTLNEQKLFY LKFILEMSNE
EISSYLKTNS NTVKTMVWRL RKKLKEYLKE EEKS