| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1835 |
|---|
| Symbol | |
|---|
| ID | 5877854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | - |
|---|
| Start bp | 1853053 |
|---|
| End bp | 1855269 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 641542187 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001663452 |
|---|
| Protein GI | 167040467 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA AAATAGACTT ATTATCATAT ACACTAATTG GTTCTGGGGA AGGTGCGGGT
ATAATAGATA GCGATGTAGT ATTAGATGAT CTTGGATTTC CCTATATTCC TTCAAGACGT
GTAAAAGGTG TATTAAAAGA AAGTGCAAAA GAAGTTTGTG ATATATTAGG CGTAAAAGAT
TATAGTATTG TTGGAAACAT ATTTGGGGAA GATGGTTTTA CAGAAGGAAA GCTGCATATA
GACAATTTAT ATATAAATAA TTACAAAAAG ATAAAAGAAG AAATTAAAAT CTTAAAAAAT
GATAAAAAAA GCACATATAA AACTTTTATA AATCCTTCTC AAATTGCATC TTATTATACA
ACTATAAGGC AGCAAACTTC TATAGATGAA GATGGAGAAA TTGCTAAAAA GGGTTCACTT
AGGACATTTA GGGTTTTAAA GCCTAATTTG CAATTTGAAG GTAAATTGTA CGAAATAACT
CCTTTAAATA AAAAAGAAAA AGCTTTATTA TATCTGGCTT CGATTAATTT AAAAAGGATA
GGTACATCAA GAAACCGTGG TTTTGGCGAA ATAAGTTGTT TGATTGAAGG TATTAAAATT
AGCAGTATTG ATGAGGCTAT TCAATATTTA AATAGTGATA ATGATAAAAA TATCACAGAA
GAGATTAAAT CTTCTAATTC AGAAAAATTT GATGGGAATA AAAAAGGAAA TGTAAAAAAA
CTATTTTACA AAATAACTGC ATTATCTCCG ATTGTGTTAG CAAAAGAGAT AGGCGAACAA
AATACAATTA ATACAGAAAA ATATATATCA TCTACAACAG TTAGAGGTTT ATTTGCAAAT
AAATTTATAA AAAAATTTAA TTTAGGTAAT GCTGCCCATG AAAACGACAA TTTTTATAAT
TTATTTTTGA AAAATGAGAT TTTATTTACT TCTGCATATC CATTTAAAAA CGGTAAAATT
TATTATCCAG CTCTTTATTT GCATAAAGAA AAAGGAGACG ATAATAAGTA TGTATACAAT
GTTTTAGAAG AAGTTCCAGA TAACAAAAAA ACAAAATCAT TGGAAAAAAT GGTCTATAAT
ACTAATGATG AAAAAATATA TACTTATGGT GTATCAACAA CATTTTATTT TCACAATGCA
AGAGACAGAG AAAAAGGACA CAGTACGGGG GAAGAAATCT TTTATTATGA GGCAATAAAT
GAAGGAGAAG AATTTAAAGG ATTTATTATT GGTGATGAGG GGTACCTTGA AGAAATAAAA
AGAATATATG GCGAAACATT TACCTCTTTT ATTGGTAGAT CAAAAAGTGC ACAATATGGT
TTAGTAAATA TAGAATTTGG CGATTTAGAA AATACGGACG ATTTAGAAGA TGTGGACGAT
GAGTTTATTA TAGTAGCAAC TTCTCCTATT ATTTTATATA ACGAATGGGG TTTTAGTGAG
GTCTCTGAAA AGACATTAAA AAATTATCTG CAGAAACATT TTGATGATTG TGATATTAAT
GTAGAAAAAA TTATTTCAAG AATTGAATAT GTTGAAAACT TCGTAGGTAT TTGGGGAATG
AAAAATACTC GTGAATTAGC TTATTCACCC GGATCAGCTT TTAAAATTAT AATTAAAGGC
TGTGATAACT TGGAAGAAAA ACTAAATAAT ATTTTAATAT ACGGATTTGG AGAGAAAACC
GATTTAGGTT TTGGTAGAGT AAAGGTATAT TCGTTTTTGA ATGAAGGTTA TAAAATTGAG
TATTATAATA GTGATGAATA CGAAGAAATA ACTCCCCAAT TCTCAAAAGT TATTTTAGAA
GATATAGTAA AGAAAAAAGC AAATGAAATT TTAAAATCTA AGGCTTTTGA GAAAGCGAAT
GATTTATATA AAAAAATTAA GAAATTCAAT GACAAAAAAG CTATTTCAAA CAATCTAATA
GGACGACTTG AAGGAATGCT GTCAGCGACT GATGAATTTG ACGAATGGGA GAGAAAATTA
GATGGATTAA ATAATAAGCC TGCTGCAGAG ACCTTAAAGG ATTTAAATCT ATGGGATGAT
TTATATAAAT TGGATATTTC TGATGAATAT AAAAATATGT TTTATGATAA TTTATTAAAA
TCTATTAATA AGCTAAATGT GGAGTTGGAT AATTTTGAGT TATCAAAAAG ATACTGGATT
TACTTCTTTA AATATTTAAG ACTATTTAAC AAGCAGGGGG GAGAAAAAGA TGAATGA
|
|---|
| Protein sequence | MKIKIDLLSY TLIGSGEGAG IIDSDVVLDD LGFPYIPSRR VKGVLKESAK EVCDILGVKD
YSIVGNIFGE DGFTEGKLHI DNLYINNYKK IKEEIKILKN DKKSTYKTFI NPSQIASYYT
TIRQQTSIDE DGEIAKKGSL RTFRVLKPNL QFEGKLYEIT PLNKKEKALL YLASINLKRI
GTSRNRGFGE ISCLIEGIKI SSIDEAIQYL NSDNDKNITE EIKSSNSEKF DGNKKGNVKK
LFYKITALSP IVLAKEIGEQ NTINTEKYIS STTVRGLFAN KFIKKFNLGN AAHENDNFYN
LFLKNEILFT SAYPFKNGKI YYPALYLHKE KGDDNKYVYN VLEEVPDNKK TKSLEKMVYN
TNDEKIYTYG VSTTFYFHNA RDREKGHSTG EEIFYYEAIN EGEEFKGFII GDEGYLEEIK
RIYGETFTSF IGRSKSAQYG LVNIEFGDLE NTDDLEDVDD EFIIVATSPI ILYNEWGFSE
VSEKTLKNYL QKHFDDCDIN VEKIISRIEY VENFVGIWGM KNTRELAYSP GSAFKIIIKG
CDNLEEKLNN ILIYGFGEKT DLGFGRVKVY SFLNEGYKIE YYNSDEYEEI TPQFSKVILE
DIVKKKANEI LKSKAFEKAN DLYKKIKKFN DKKAISNNLI GRLEGMLSAT DEFDEWERKL
DGLNNKPAAE TLKDLNLWDD LYKLDISDEY KNMFYDNLLK SINKLNVELD NFELSKRYWI
YFFKYLRLFN KQGGEKDE
|
|---|
| |