| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_R0026 |
|---|
| Symbol | |
|---|
| ID | 4245303 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4598528 |
|---|
| End bp | 4601408 |
|---|
| Gene Length | 2881 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 640717054 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0380679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000773701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GGTCAAGTTA TAAAGGGCTG ACGGTGGATA CCTAGGTACA CAGAGGCGAA GAAGGACGTG
GTTACCTACG AAAAGTTCCG GGGAGTTGGA AGCAAGCATT GAGCCGGAAA TATCCGAATG
GGGCAACCCA AAAACGACAG GCTGAATATA TAGGCCTGCA CGAGCGAACC CAGCCAACTG
AAACATCTTA GTAGCTGGAG GAAGAGAAAG CAAAAGCGAT TTCCAATGTA GCGGTGAGCG
AAATGGAAAC AGCCTAAACC ATGTGTAATT ACATGTGGGG TAGTGGGACA ACCATTAGGA
ATAGAATAAA GTTAGATGAA ACAGCGGAAT ACTGTACCAG AGAAGGTGAA AGTCCTGTAG
TCAAAAACTA AATTTGATTC CGGTTGTATC CCGAGTAGCA TGGGGCACGT GAAATCCCGT
GTGAATCAGC GAGGACCACC TCGTAAGGCT AAATACTCCT GTGTGACCGA TAGTGAACCA
GTACCGCGAG GGAAAGGTGA AAAGAACCCC GGAAGGGGAG TGAAATAGAA TATGAAACCG
TCAGCTTACA AGCAATGGGA GCTCGATTTA ACGAGTGACC GTGTGCCTGT TGAAGCATGA
GCCGGCGAGT TATAGGCTGT GGCTGGTTAA GACCAGAAAG GTTGAAGCCA AAGAGAAAGC
GAGTCTGAAG AGGGCGTAAA GTCACAGTTT ATAGACCCGA ACCCGGGTGA TCTAACCATG
TCCAGGATGA AGCTTGGGTA ACACCAAGTG AAGGTCCGAA CCGACCGATG TTGAAAAATC
GGCGGATGAG GTGTGGTTAG GGGTGAAATG CCAATCGAAC CCGGAGCTAG CTGGTTCTCC
CCGAAATGTG TTGAGGCGCA GCGGTAAGAG AAAAAGTCTG GGGGTAAAGC ACTGTTTCGG
TGCGGGCTGC GAGAGCGGTA CCAAATCGAG ACAAACTCAG AATACCAGAT GGAAATCTTA
CCAGTGAGAC GGTGGGGGAT AAGCTTCATC GTCGAAAGGG AAACAGCCCA GACCACCAGC
TAAGGTCCCC AAATTATCAC TAAGTGAGAA AGGAGGTTGG AGTGCATAGA CAACCAGGAG
GTTGGCTTAG AAGCAGCCAC CCTTAAAAGA GTGCGTAATA GCTCACTGGT CAAGGACTCT
GGCGCCGAAA ATGAACGGGG CTAAGTGATA TACCGAAGCT GTGGAATACT AAAAGTATTG
GTAGGGGAGC GTTCCGTATT AGTACGAAGC AGTAGCGAAA GCAGTTGTGG ACGAAACGGA
AGTGAGAATG TCGGCTTGAG TAGCGAAAAT ATGTGTGAGA ATCACATACC CCGAAACCCT
AAGGGTTCCT CCGGACGGCT CGTCCGCGGA GGGTGAGTCA GGACCTAAGG CGAGGCCAAA
AGGCGTAGTC GATGGACAAC GGGTAAAAAT TCCCGTACCG TAAATAGTTG GTGCAGAGGG
ACGGAGAAGG CGTGAGCTAG CCGGAAGATG GTTACCGGTG TAAGCGTTCA AGGTGTTGCG
GAATGGAGAA AACGTTCCAA GCTGAGGCGT GAGTCCGAGC ACCTAAGGGT GCGAAGTAGT
ATCTGTCATG CTTCCTAGAA AAGCTCTAAA CACCATAAAC TATTAACGCC TGTACCCGAA
ACCGACACAG GTAGGGTAGT TGAGAATACT AAGGGGCGCG AGATAACTCT CTCTAAGGAA
CTCGGCAAAA TGGCCCCGTA ACTTCGGGAG AAGGGGTACC AGCGAGAGCT GGTCGCAGTG
AAGAGTCCCA GGCGACTGTT TACCAAAAAC ACAGGTCTCC GCAAAGTCGA AAGACGAAGT
ATGGGGGCTG ACGCCTGCCC AGTGCCGGAA GGTTAAGGAA GTCGGTCAGC GAAAGTGAAG
CTGGCGACCG AAGCCCCGGT GAACGGCGGC CGTAACTATA ACGGTCCTAA GGTAGCGAAA
TTCCTTGTCG GGTAAGTTCC GACCCGCACG AAAGGCGTAA CGATCTGGGA GCTGTCTCAG
AGAGAGACTC GGCGAAATAG AAATGTCTGT GAAGATACGG ACTACCTGCA CCCGGACAGA
AAGACCCTAT GAAGCTTTAC TGTAGCCTGG AATTGTGTTC GGGCTTCTCT TGCGCAGGAT
AGGTGGGAGG CGATGAATAG TCCCTTGTGG GGGTCTAGGA GCCATCGGTG AGATACCACT
CTAGAGAGGC TAGAATTCTA ACTTAGAGCC GTATCCGGCC TAAAGACAGT TTCAGGGGGG
CAGTTTGACT GGGGCGGTCG CCTCCTAAAA GGTAACGGAG GCGCGCAAAG GTTCCCTCAG
GCTAGTTGGA AATTAGCCGA AGAGTGTAAA GGCAAAAGGG AGCTTGACTG TAAGAGAGAC
AACTCAAGCA GGGTGGAAAC ACGGCCTTAG TGATCCGACG GTACTGAGTG GAAAGGCCGT
CGCTCAACGG ATAAAAGTTA CTCTAGGGAT AACAGGCTGA TCTCCCCCAA GAGTTCACAT
CGACGGGGAG GTTTGGCACC TCGATGTCGG CTCATCGCAA CCTGGGGCGG AAGTACGTCC
CAAGGGTTGG GCTGTTCGCC CATTAAAGCG GTACGTGAGC TGGGTTCAGA ACGTCGTGAG
ACAGTTCGGT CCATATCCGG TGTAGGCGTA AGAGTATTGA GAGGAGTCCT CCCTAGTACG
AGAGGACCGG GAGGAACGCA CCGCTAGTGT ACCTGTTATC GTGCCAACGG TAAACGCAGG
GTAGCCAAGT GCGGAGTGGA TAACCGCTGA AAGCATCTAA GTGGGAAGCC CACCTCAAGA
TGAGTACTCT CACTACGTTA GGTAGGTAAG GTCACGGGAA GACGACCCGT TAATAGGTGT
TAGGTGGAAG TGCAGTAATG TATGGAGCCT AGACATACTA ACAGACCGAG GGCTTGACCT
C
|
|---|
| Protein sequence | |
|---|
| |