Gene Tery_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4536 
Symbol 
ID4246190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6998234 
End bp6998722 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content32% 
IMG OID638109413 
Productpathogenesis-related transcriptional factor and ERF 
Protein accessionYP_723989 
Protein GI113477928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.408685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0574079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAG AAATTTTGAT TACTAGAGGG CAGATAGTAA TAGTGGATGA ACAAGACTAT 
GAAGAATTAT CAAAGCATAA ATGGTACTTA ATAGATGGGT TTGCTGCTAG AACAATAAAA
AAAGAGGAAA AGAGAACTAC TATATATATG CACAGAGTGA TTATGGATGC TCCTATGGGT
GTATCTGTTT ATCATATTAA TCACAATAAA CTAGATAATC AGCGAGAAAA TTTACGCTTA
GTTAAAGGAA GTGCGCGAAT GCACAGAAGA CCTAGCGTTA AACATTCATC TAAATACCGA
GGAGTGTATT GGTGTAAGGA TAAACGTAAA TGGATAGCAG AAATTAAAGT TTACAAAAAG
CAAATACGTT TAGGTCGTTT TGAGGTAGAA AAAGATGCAG CTATTGCTTA CGATGAAGCA
GCAAGAAAAT ATTATGGTTC TCTAGCTAGA ACAAATTTTA CAATAAATAA TATAGAGGTA
AAAGAATAA
 
Protein sequence
MSKEILITRG QIVIVDEQDY EELSKHKWYL IDGFAARTIK KEEKRTTIYM HRVIMDAPMG 
VSVYHINHNK LDNQRENLRL VKGSARMHRR PSVKHSSKYR GVYWCKDKRK WIAEIKVYKK
QIRLGRFEVE KDAAIAYDEA ARKYYGSLAR TNFTINNIEV KE