Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4536 |
Symbol | |
ID | 4246190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6998234 |
End bp | 6998722 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638109413 |
Product | pathogenesis-related transcriptional factor and ERF |
Protein accession | YP_723989 |
Protein GI | 113477928 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.408685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0574079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTAAAG AAATTTTGAT TACTAGAGGG CAGATAGTAA TAGTGGATGA ACAAGACTAT GAAGAATTAT CAAAGCATAA ATGGTACTTA ATAGATGGGT TTGCTGCTAG AACAATAAAA AAAGAGGAAA AGAGAACTAC TATATATATG CACAGAGTGA TTATGGATGC TCCTATGGGT GTATCTGTTT ATCATATTAA TCACAATAAA CTAGATAATC AGCGAGAAAA TTTACGCTTA GTTAAAGGAA GTGCGCGAAT GCACAGAAGA CCTAGCGTTA AACATTCATC TAAATACCGA GGAGTGTATT GGTGTAAGGA TAAACGTAAA TGGATAGCAG AAATTAAAGT TTACAAAAAG CAAATACGTT TAGGTCGTTT TGAGGTAGAA AAAGATGCAG CTATTGCTTA CGATGAAGCA GCAAGAAAAT ATTATGGTTC TCTAGCTAGA ACAAATTTTA CAATAAATAA TATAGAGGTA AAAGAATAA
|
Protein sequence | MSKEILITRG QIVIVDEQDY EELSKHKWYL IDGFAARTIK KEEKRTTIYM HRVIMDAPMG VSVYHINHNK LDNQRENLRL VKGSARMHRR PSVKHSSKYR GVYWCKDKRK WIAEIKVYKK QIRLGRFEVE KDAAIAYDEA ARKYYGSLAR TNFTINNIEV KE
|
| |