| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4482 |
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| Symbol | murD |
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| ID | 4246135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6921042 |
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| End bp | 6922430 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638109365 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_723942 |
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| Protein GI | 113477881 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0724066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAAG CTCATATTAT TGGTTTCGGA AAATCAGGTG TAGCTGCTGC GCGACTACTG
AAAAAAAATG GTTGGGAAGT TGAATTGAGC GATCGCAATA CTTCCGACTC CTTGCAGCAA
AAAGAAAAGC AGTTAACTCA AGAGGGTATT ACTGTTAAGT TAAATTATTC ATTTGAACCA
GAAACCTCTC TAGATTTAGT CATTGTTAGT CCTGGTGTTC CCTGGGACCT ACCTGCATTG
CAACGGTCTA GAGAAACTGG AATTGAAACA ATAGGGGAAA TGGAGTTAGC GTGGCGATAT
CTCAAGTCTT CCTCCTGGGT GGGTATTACC GGTACTAATG GCAAAACTAC TACTACTGCT
TTAACTGCTG CGATTTTTCA GACGGCCGGA TTGTATGCCC CTGCTTGTGG TAATATAGGA
TATGCTGCTT GTGAATTGGC CTTACAGGAC ACTCTACCGG ATTGGGTAAT TGCAGAAATA
AGTAGTTATC AAATTGAGTC TTCCAATACT CTAAGTCCAC AAATTGCTGT ATGGACTACT
TTTACTGCGG ACCATCTTAG TCGCCACTAC AATTTGGAAA ATTATTTTAA TATTAAAGCT
GATTTATTAA ATCGCTCTCA AATACAAATT CTCAATGGTG ATGACTACTA CCTTCATGAA
AATGCAGCAC ATCTTTATCA TAATTCTTAC TGGACAAGTA TTCAGGGAAA AGCTAATTTA
GTGGCAGATG TGACTAGAGG AATTTATCTT GAAGATGGAT GGGTAGTAGC TTTGCAGGAA
AAAATAATTC CTGTGGAGTT GTTGCAAATG TTGGGAAGTC ATAATCAGCA GAATTTATTG
ATGGCAGTGG CAGTGGCGAA GTTTGCAGGG ATAGAAAATG AGGCGATCGC CGAGGCGGTG
AAAAATTTTC CTGGTGTCCC CCACCGTCTA GAATATATTT GCAGATGGAA TGGAGTAGAT
TTTATTAATG ATAGTAAAGC TACAAATTAT GATGCTGCAG CAATGGGTTT AAAAGCTTTA
GTAGCACCTA TATTATTGAT TGCTGGTGGT GAAGCTAAAG AGGGTAATGA TAATGATTGG
TTGCGACAAA TTAAGGAAAA AGTTGTTTTT GTTTTGTTAA TTGGTAGTGC TGCTGAGTTT
TTAGCTAAGA GATTACAAAA GATTAATTTT CTGAATTATG AAATAGTAGA AAATATGGAA
CGTGCAGTAA TTAGAGGTGC AGCATTGTCA AAAAAATATG ATGCTAAGAC TGTGTTATTA
TCTCCCGCTT GTGCTAGTTT TGACCAGTAT CAAAATTTTG AAGAAAGAGG AGAAGTTTTT
CGCCAGTTAT CTTTAGGATT AAACCATAAG AAAAAAAATG ACATAAGGTT TGGTTCAAGC
AGAATTTAA
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| Protein sequence | MSKAHIIGFG KSGVAAARLL KKNGWEVELS DRNTSDSLQQ KEKQLTQEGI TVKLNYSFEP
ETSLDLVIVS PGVPWDLPAL QRSRETGIET IGEMELAWRY LKSSSWVGIT GTNGKTTTTA
LTAAIFQTAG LYAPACGNIG YAACELALQD TLPDWVIAEI SSYQIESSNT LSPQIAVWTT
FTADHLSRHY NLENYFNIKA DLLNRSQIQI LNGDDYYLHE NAAHLYHNSY WTSIQGKANL
VADVTRGIYL EDGWVVALQE KIIPVELLQM LGSHNQQNLL MAVAVAKFAG IENEAIAEAV
KNFPGVPHRL EYICRWNGVD FINDSKATNY DAAAMGLKAL VAPILLIAGG EAKEGNDNDW
LRQIKEKVVF VLLIGSAAEF LAKRLQKINF LNYEIVENME RAVIRGAALS KKYDAKTVLL
SPACASFDQY QNFEERGEVF RQLSLGLNHK KKNDIRFGSS RI
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