| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4474 |
|---|
| Symbol | |
|---|
| ID | 4246127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6906691 |
|---|
| End bp | 6907881 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638109357 |
|---|
| Product | N-acetylglucosamine 6-phosphate deacetylase |
|---|
| Protein accession | YP_723934 |
|---|
| Protein GI | 113477873 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0902542 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTAA CTACTAAAAT TATTAATGCT AAGGTCCCTG GTTATCAAAA CCTACAGCAA
ATTTTCATCA ATTCTACTGG CAATATTGAG AAAATTATCC CTCAAAATGG AGAGGCTTTG
CCTAGCACAT CTACTACTAT TGATGTGGAA CAAGACTGGG TTTCTCTCGG AGGGTTTGAT
TTACAAATTA ATGGTGCTTT GGGTTTACCT TTTCCGGAAG TAGATGAAAC TTCAATAACT
AAAATACATG AAATTTGTCA ATATTTATGG CACCAGGGAA TAGATGCTTT TTTGCCTACT
ATTGTCACAA CTTCTATAGA TAATATTCAG CGATCGCTCC AAATCTTCGA CTATTTGGCC
TCACAACCCC AAGAACCAAA AACAGCTAAA ATTTGGGGCG TACATTTGGA AGGGCCTTTT
TTGCATCCAG AAAAGCGGGG CGCTCACCCT CAGAAATATT TGCTACCATT AAGCATCGAA
AATGTCAAGC AGGTAATCGG CGATTATAGT CAGACAGTTA AAATTATCAC TTTAGCACCG
GAATTAGACA GTACAGAAAC AATAATTCCT TACCTAAAAA ATCTAGGAAT TATAGTTAGT
TTAGGGCATT CTCAGGCGAC AGCAAATCAA GCAGAAACAG CTTTTAAATT AGGAGCTTCA
ATGGTAACTC ATGCCTTCAA TGCTATGGGC AGTTTACATC ATCGAAAACC AGGATTATTA
GGAGCAGCAA TTACAAATTC TGAGGTTATG TGTGGTTTAA TTGCTGATGG TCAGCATGTC
TGTTCAACAA TGATAGAAAT TTTGTTAAAA GCAAGTCAAT ATCAGCAAGG AATATTTTTG
GTTAGTGATG CTTTGGCGCC TTTGGGATTA CCTGATGGAA TTTACCCTTG GGATGCTAGA
GAAATAGAAG TTAAAAATGG TACGGTTAGA TTACAAGATG GAATATTAGC GGGAACAACT
TTACCTTTAT TGGTTGGAGT TAATAATTTG GTAAAGTGGG GGGTTTGTGA TATTGAAACT
GCAATTAATT TAGGGACTAT TGCACCTCGG AAAGCTTTAG GAATAGACAG TAAAATTATT
GGGAAGTCTG GAAATAGTTT ATTAAGGTGG CGGGTAAATA GTCAGTTATT TAATAAGGAG
ATAGAGTTGG TTTGGCAGAG AATATTTGGA GTTGATTACA TAGATAGATA A
|
|---|
| Protein sequence | MNLTTKIINA KVPGYQNLQQ IFINSTGNIE KIIPQNGEAL PSTSTTIDVE QDWVSLGGFD
LQINGALGLP FPEVDETSIT KIHEICQYLW HQGIDAFLPT IVTTSIDNIQ RSLQIFDYLA
SQPQEPKTAK IWGVHLEGPF LHPEKRGAHP QKYLLPLSIE NVKQVIGDYS QTVKIITLAP
ELDSTETIIP YLKNLGIIVS LGHSQATANQ AETAFKLGAS MVTHAFNAMG SLHHRKPGLL
GAAITNSEVM CGLIADGQHV CSTMIEILLK ASQYQQGIFL VSDALAPLGL PDGIYPWDAR
EIEVKNGTVR LQDGILAGTT LPLLVGVNNL VKWGVCDIET AINLGTIAPR KALGIDSKII
GKSGNSLLRW RVNSQLFNKE IELVWQRIFG VDYIDR
|
|---|
| |