Gene Tery_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4445 
Symbol 
ID4246098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6850348 
End bp6851202 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content39% 
IMG OID638109328 
ProductM15B family D-Ala-D-Ala carboxypeptidase VanY 
Protein accessionYP_723905 
Protein GI113477844 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.585911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTT TGAATAAGCT GGGTTTATTA AAAAAAACAC CAGATGAGGC AAAATTACCA 
GTAGATGATA TTCCTGAAGC TGTAAGAGAT GAAGAAGAAA GTGCCAAACA CCAATCTTTT
AAGCCTCAGA AAATCTGGCA AATTTGGCAA TTATTAGCAA TGGGGGCGAT CGCTCTCATA
ATTAGTATTA GTTGGCATTT CCAATTTAAC AAAACTCTCA ACACATCTCC TGTCGTCCAA
ATGAAACAAA AAATCAGCAC AAAAGCAGTT GAAACATCTC CAACTCAATT AGAAACACCT
TCACCTTCGC CATCTTTCAA TTCTTCCATT AAGCAGAGAG AAAATATCCT CGGACACTTG
CCCTACAAAG AAGCATCTTG GCAAGAATTA ACACCAGTTT TTGGCAATCA AAATATTAGA
CTGCGTTCAA TTGCAGCAGA AAAATTTGAT CTTATGGCAG ATGTAGCTTG GTCTGCAAAT
ATCGAGTTGG TTCCTCTCTC AGGGTTTAGA ACTGTGGGAG ATCAACAATA TTTATTCTTT
GAGGTGAAAG CAGAGCGGGG ACAGGAAACA TCTAAAAGAG CAGAAGTTAG TGCCCCTCCA
GGTTACAGCG AACATCATAC AGGTTACGCT ATTGATATTG GTGATGCTAG AATGCCAGAG
ACTCATCTCG AAGTTAGTTT TGAAAACACA AAAGCTTTCC AGTGGCTGCA AGAAAATGCT
GAGAATTATG GTTTTGAGTT ATCATTTCCC AAAGATAATC CTCAAGGTAT TAGTTATGAA
CCTTGGCATT GGAGGTTTGT AGGAGATAGT CATAGTTTAA AGACTTTTGA GGAGGCGAGG
TCACTCAAGG AGTGA
 
Protein sequence
MKILNKLGLL KKTPDEAKLP VDDIPEAVRD EEESAKHQSF KPQKIWQIWQ LLAMGAIALI 
ISISWHFQFN KTLNTSPVVQ MKQKISTKAV ETSPTQLETP SPSPSFNSSI KQRENILGHL
PYKEASWQEL TPVFGNQNIR LRSIAAEKFD LMADVAWSAN IELVPLSGFR TVGDQQYLFF
EVKAERGQET SKRAEVSAPP GYSEHHTGYA IDIGDARMPE THLEVSFENT KAFQWLQENA
ENYGFELSFP KDNPQGISYE PWHWRFVGDS HSLKTFEEAR SLKE