Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4445 |
Symbol | |
ID | 4246098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6850348 |
End bp | 6851202 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638109328 |
Product | M15B family D-Ala-D-Ala carboxypeptidase VanY |
Protein accession | YP_723905 |
Protein GI | 113477844 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.585911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAATTT TGAATAAGCT GGGTTTATTA AAAAAAACAC CAGATGAGGC AAAATTACCA GTAGATGATA TTCCTGAAGC TGTAAGAGAT GAAGAAGAAA GTGCCAAACA CCAATCTTTT AAGCCTCAGA AAATCTGGCA AATTTGGCAA TTATTAGCAA TGGGGGCGAT CGCTCTCATA ATTAGTATTA GTTGGCATTT CCAATTTAAC AAAACTCTCA ACACATCTCC TGTCGTCCAA ATGAAACAAA AAATCAGCAC AAAAGCAGTT GAAACATCTC CAACTCAATT AGAAACACCT TCACCTTCGC CATCTTTCAA TTCTTCCATT AAGCAGAGAG AAAATATCCT CGGACACTTG CCCTACAAAG AAGCATCTTG GCAAGAATTA ACACCAGTTT TTGGCAATCA AAATATTAGA CTGCGTTCAA TTGCAGCAGA AAAATTTGAT CTTATGGCAG ATGTAGCTTG GTCTGCAAAT ATCGAGTTGG TTCCTCTCTC AGGGTTTAGA ACTGTGGGAG ATCAACAATA TTTATTCTTT GAGGTGAAAG CAGAGCGGGG ACAGGAAACA TCTAAAAGAG CAGAAGTTAG TGCCCCTCCA GGTTACAGCG AACATCATAC AGGTTACGCT ATTGATATTG GTGATGCTAG AATGCCAGAG ACTCATCTCG AAGTTAGTTT TGAAAACACA AAAGCTTTCC AGTGGCTGCA AGAAAATGCT GAGAATTATG GTTTTGAGTT ATCATTTCCC AAAGATAATC CTCAAGGTAT TAGTTATGAA CCTTGGCATT GGAGGTTTGT AGGAGATAGT CATAGTTTAA AGACTTTTGA GGAGGCGAGG TCACTCAAGG AGTGA
|
Protein sequence | MKILNKLGLL KKTPDEAKLP VDDIPEAVRD EEESAKHQSF KPQKIWQIWQ LLAMGAIALI ISISWHFQFN KTLNTSPVVQ MKQKISTKAV ETSPTQLETP SPSPSFNSSI KQRENILGHL PYKEASWQEL TPVFGNQNIR LRSIAAEKFD LMADVAWSAN IELVPLSGFR TVGDQQYLFF EVKAERGQET SKRAEVSAPP GYSEHHTGYA IDIGDARMPE THLEVSFENT KAFQWLQENA ENYGFELSFP KDNPQGISYE PWHWRFVGDS HSLKTFEEAR SLKE
|
| |