Gene Tery_4177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4177 
Symbol 
ID4245829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6438869 
End bp6439591 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID638109078 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_723656 
Protein GI113477595 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.539772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCACTC TTGGCGTCAA TATAGATCAT GTTGCTACAA TTAGACAAGC GCGACAAACT 
GTAGAACCTG ACCCGGTAGC AGCAGCAGTT TTAGCTGAAC TAGCTGGTGC TGATGGCATT
ACTGTCCATC TACGGGAAGA TCGTCGCCAC ATTCAAGAAC GAGATGTCCA TATTCTCCGA
CAAACAGTGC AGACTCATTT GAATCTCGAA ATGGCCCCTA CTGATGAAAT GGTGGCGATC
GCTCTGGAAA TTAAACCGGA CTATATTACT CTGGTACCAG AACGCCGAGA AGAAGTGACG
ACAGAAGGTG GTTTAGATGT AGCAGGAAAT CTCTCCCAAA TGAGGAAAGT TGTAGCCCAG
TTACAAGGAG TGGGTATTCC TGTGAGTATG TTTATTGATC CCGAAAGACT ACAGATAGAA
GCTTCCGCCC AAATTGAGGC CAAGTTTATT GAACTCCATA CAGGATCTTA TGCTGAAGCT
AAAAATGAGG CCACACGCCA CAAAGAATTA ACTATTTTGG CAGATGGATG CAACATAGCT
ATTAATCATG GTCTTCGGGT AAATGCTGGA CATGGCCTCA CTTATGAGAA TGTTTATTCA
GTTGCTTGTC TAAAAGGCAT GGAAGAACTC AACATTGGTC ATACAATTGT TTCTAAGGCG
GTACTCGTGG GTATGGAGCG AGCTGTCCGT GAAATGAAGC TTGCTATTAA TGGCAAGTTC
TAA
 
Protein sequence
MPTLGVNIDH VATIRQARQT VEPDPVAAAV LAELAGADGI TVHLREDRRH IQERDVHILR 
QTVQTHLNLE MAPTDEMVAI ALEIKPDYIT LVPERREEVT TEGGLDVAGN LSQMRKVVAQ
LQGVGIPVSM FIDPERLQIE ASAQIEAKFI ELHTGSYAEA KNEATRHKEL TILADGCNIA
INHGLRVNAG HGLTYENVYS VACLKGMEEL NIGHTIVSKA VLVGMERAVR EMKLAINGKF