| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4177 |
|---|
| Symbol | |
|---|
| ID | 4245829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6438869 |
|---|
| End bp | 6439591 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638109078 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_723656 |
|---|
| Protein GI | 113477595 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.539772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCACTC TTGGCGTCAA TATAGATCAT GTTGCTACAA TTAGACAAGC GCGACAAACT
GTAGAACCTG ACCCGGTAGC AGCAGCAGTT TTAGCTGAAC TAGCTGGTGC TGATGGCATT
ACTGTCCATC TACGGGAAGA TCGTCGCCAC ATTCAAGAAC GAGATGTCCA TATTCTCCGA
CAAACAGTGC AGACTCATTT GAATCTCGAA ATGGCCCCTA CTGATGAAAT GGTGGCGATC
GCTCTGGAAA TTAAACCGGA CTATATTACT CTGGTACCAG AACGCCGAGA AGAAGTGACG
ACAGAAGGTG GTTTAGATGT AGCAGGAAAT CTCTCCCAAA TGAGGAAAGT TGTAGCCCAG
TTACAAGGAG TGGGTATTCC TGTGAGTATG TTTATTGATC CCGAAAGACT ACAGATAGAA
GCTTCCGCCC AAATTGAGGC CAAGTTTATT GAACTCCATA CAGGATCTTA TGCTGAAGCT
AAAAATGAGG CCACACGCCA CAAAGAATTA ACTATTTTGG CAGATGGATG CAACATAGCT
ATTAATCATG GTCTTCGGGT AAATGCTGGA CATGGCCTCA CTTATGAGAA TGTTTATTCA
GTTGCTTGTC TAAAAGGCAT GGAAGAACTC AACATTGGTC ATACAATTGT TTCTAAGGCG
GTACTCGTGG GTATGGAGCG AGCTGTCCGT GAAATGAAGC TTGCTATTAA TGGCAAGTTC
TAA
|
|---|
| Protein sequence | MPTLGVNIDH VATIRQARQT VEPDPVAAAV LAELAGADGI TVHLREDRRH IQERDVHILR
QTVQTHLNLE MAPTDEMVAI ALEIKPDYIT LVPERREEVT TEGGLDVAGN LSQMRKVVAQ
LQGVGIPVSM FIDPERLQIE ASAQIEAKFI ELHTGSYAEA KNEATRHKEL TILADGCNIA
INHGLRVNAG HGLTYENVYS VACLKGMEEL NIGHTIVSKA VLVGMERAVR EMKLAINGKF
|
|---|
| |