| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4119 |
|---|
| Symbol | |
|---|
| ID | 4245633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6353492 |
|---|
| End bp | 6354223 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638109020 |
|---|
| Product | prepilin-type cleavage/methylation-like |
|---|
| Protein accession | YP_723600 |
|---|
| Protein GI | 113477539 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.290061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC AACAAATTCA GCAAAAAATC CTAAAATGGC AACAAACTAA TCCTAATTCA
GGTTACACTA TCCTGGAAGG GTTGGTGGCG ATGGTTCTCG TAGCGACAAC AATGAGCGCT
ATTGCTCCGG TTGTTGCTTT ATCAGTGGGG AGGCGGGTGC AGGCACGACG GGTCGAACTG
GCGACGCAAG CGGCCAGGAG TTATATTGAT GCTGTGAGGC AAGGGGATAT AGAGCCTCCA
AAAATAGCTC TCACTGATCC AGAGGGATGG AGCACAGTTC AAGGGGTAAA GGTTCCAACA
GAGCTAGACT GCAAAGATCT AGACCTCAAA AAACTAAACC CAAAGAAGTA TTGTAAAACA
GCTGTAAATC ACCTTGGAGT TGCTTCCAAC TTATACTGCG TTGATGGAGG AGACGGAGGT
GACTGCAAAG GGTTGACAGA TATGATTGTA TATGCTGTAG GGTTTCATGG GGATTACGAG
AAACCTGAGT ATGGCTACGA ATTATTTGTG TGGGTTTATA GGGGTGGGGG CGTCGAAGGG
TTTGAGCTGT TGAATGAGAC CATATCGACT TATTCTAATA ATGCAGGGTT GGCTACTAGA
TATGGCGATA AAGAAAGGGC ACTGTTTAAA ACAACAACAG AGATAGCTCC AAAGAAACTC
TATGGTTCAT TTAAAAATAT TTGCGATCGC GTGAAAGACA AACACTCAGA AAAACATTGT
GGCACAGAAT AA
|
|---|
| Protein sequence | MNKQQIQQKI LKWQQTNPNS GYTILEGLVA MVLVATTMSA IAPVVALSVG RRVQARRVEL
ATQAARSYID AVRQGDIEPP KIALTDPEGW STVQGVKVPT ELDCKDLDLK KLNPKKYCKT
AVNHLGVASN LYCVDGGDGG DCKGLTDMIV YAVGFHGDYE KPEYGYELFV WVYRGGGVEG
FELLNETIST YSNNAGLATR YGDKERALFK TTTEIAPKKL YGSFKNICDR VKDKHSEKHC
GTE
|
|---|
| |