Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4108 |
Symbol | |
ID | 4245622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6336267 |
End bp | 6337910 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638109009 |
Product | CopG-like DNA-binding |
Protein accession | YP_723589 |
Protein GI | 113477528 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.996813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAAA AACGTGGTAG TGCCACCTCT TATAGAGAAA CCAAGGTTAA AGTAGGTGTG TCTCTTACTC CCACTAGCGC TGAGAAGCTA AAAGAAGTAG CAAAAGAACT TGGATTATCA AGGTCTGAGC TACTTGAGCG TATTGCTAGA GGAGACCTTG CTGTTTTGAG AGAGGCGGCA CAGATAACAG CGAATTTAAA TAATCAGTTG GTTCCAGTCA ACAATGTGCT GGGTAAAAAT GAACTCCCTG AAAGTGGTAT AGATGTTGTG ACAATTCCAG AACCATTAAA TGAGTCTGTA GAAGCACAAT ATTTATTATC AGAAAGTTAT CAAATTTTAC AACAAGAGTT GGAATCTCAG ATGGCACAGG TTAAGCATTT GGAAAAGCAA ATGGTTAATA TGGTGTCAAA AGAAAGTTAT GAAACTTTAC AAAAACAATT AGAAGAAGAT AAGAAAGAAA TTACAAGTTC TCGCCAAAAG TTAGCTCAAC TCAAGCAATT AGAAGAGCAA GTGGCTTTAA TGATACCAAG GGAAAGCTAC AAAACTCTAG AGCAAGAGTC TCAAGAGCAA AAATTGCAAT TGGAACTTTT GGAAGAGCAA GTAGGTTCAA TGGTGCCCAA AGAAATTCAT GATTCTTTGC AGTACCAGTC ACAACAGCAA GAAACTCAAA TTCAACAACT AGAATTACAA GTAGCTTCTA TGGTTTCCCA AGAAGTATAC GAAATTCTAC AACAAGAGTC TCAAGAACAA AAAGTTAGGT TACAACTGTT AGAAGATCAA GTAGCTTGTA TGGTGTCTCA AGGAGTTCAT AATTCCTTGC AGGAACAGTC ACAACAGCAA GAAACTCAAA TTCAACAACT AGAGTCACAA GTAGCTTCTA TGGTGTCCCA AGAAGTATAC AAAATTCTAC AGCAGGAGTC TCAAGAACAA AAAGCGAAGT TGGAGCTGTT GGAAGAGCAA GTAGATTCTA TGGTGTCCCC AGAAATTCAC GATTCTTTGC AGCAGCAGTC ACAACAGCAA GAAACTCAAA TTCAGCAACT AGAATCACGA GTAACTTCTA TGGTGTCCCA AGAAGTATAC AAAATTCTAC AGCAGGAGTC TGAAGGACAA AGAGTCAAGT TGGAACTGTT GGAAGAGCAA GTAGCTTGTA TGGTGTCCCA AGAAATTTAT AATTCTTTGC AGCACCGATC ACAGCAGCAA GAAACTCAAA TTCAGCAACT AGAATCACAA GTAGCTTCTA TGGTTTTACA CGAAAGTTAT GATGCTTTGC AACGTCACTC AGAAGAACAG GAAAATAAGT TGCAAGACCT AGAAGAACAA GTGGCCACAA TGGTGACTAG AACAGTCTAT GAGACTTTGC AAAAACAGTT ACAAGAACAA GTGAATAACT TGCAATACAT GGAATCTATG CTTGGTTCAA TGATATCCCA GCAAACCTAT GAAGCTTTAA AAAAAGAGTC AGAATTTCAA AAACAAATAA TTGCAGATTA TCAAAATAAG CTGACTCAGT TACAAGAGAA GTATCATAGC CAATCTGAGC TATTAGAGAC TTCTAAAAAA GAAGTTTCTC AGTTAAAAAC CCCAGCTATG ATTGGAGAAA ATCGATATCT TAACAAGTGG CAATATCGGA CTTTTTCCAG ATAA
|
Protein sequence | MTKKRGSATS YRETKVKVGV SLTPTSAEKL KEVAKELGLS RSELLERIAR GDLAVLREAA QITANLNNQL VPVNNVLGKN ELPESGIDVV TIPEPLNESV EAQYLLSESY QILQQELESQ MAQVKHLEKQ MVNMVSKESY ETLQKQLEED KKEITSSRQK LAQLKQLEEQ VALMIPRESY KTLEQESQEQ KLQLELLEEQ VGSMVPKEIH DSLQYQSQQQ ETQIQQLELQ VASMVSQEVY EILQQESQEQ KVRLQLLEDQ VACMVSQGVH NSLQEQSQQQ ETQIQQLESQ VASMVSQEVY KILQQESQEQ KAKLELLEEQ VDSMVSPEIH DSLQQQSQQQ ETQIQQLESR VTSMVSQEVY KILQQESEGQ RVKLELLEEQ VACMVSQEIY NSLQHRSQQQ ETQIQQLESQ VASMVLHESY DALQRHSEEQ ENKLQDLEEQ VATMVTRTVY ETLQKQLQEQ VNNLQYMESM LGSMISQQTY EALKKESEFQ KQIIADYQNK LTQLQEKYHS QSELLETSKK EVSQLKTPAM IGENRYLNKW QYRTFSR
|
| |