Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4103 |
Symbol | |
ID | 4245617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6329323 |
End bp | 6330942 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638109004 |
Product | beta-lactamase-like |
Protein accession | YP_723584 |
Protein GI | 113477523 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.352914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAAATT TAGAATGTTT AGCTTACAGT GTAGGTCACG CAGATGATGG AATATGTCTG CTAGTTCGCA TTGGAATACA CCGGATTTTA TTAGATTGTG GTATTACAAA TATTTCATTA TTAACTAATG AAACAAAACA ACAACTACCT GCTGATATTG TATTGTGTTC CCACGCACAT TCAGATCATG CTCAAGGACT ATTAGCACTT CACCGAAGCT TTCCAGATCT GCCAATATAT GCTAGCGAGG CAACAACTAA ACTTCTACCT CTAAATTGGC CAGAACTTAC TATTTGTGAA GTCCCTGATT TTTGTCAACC TCTACCTTGG CACTCACCAA TAGAACTTTG TAGTGGTCTA ACTGTAGAGC TTTTTCCTGC TGGTCATTTA CCAGGGGCAA CAGCTTTTCT ACTCACCTAT ACTCAAGGAA ATCGAACCTA TAAGCTTTTA TACACGGGAG ATTTCTTTTT ATCTAAAAGC CGTTTAGTTG AAGGTCTCCC TTTAGCATAC TTACGAGGAC TCAAGCTAGA TGTATTAATA GTTGAAGGTA GCTATGGCAC AGCCCATTAT CCACATAGGC GACAATTAGA AAACAACCTT GCAGAAAGGA TATATGAAGC TATTGCTTTT GGAACTTCAG TTATCTTGCC CACTCCCCCT TTAGGGTTAG GGCAAGAATT GTTAATGCTT CTACGCAGTC ATCATTATTT CACAGGTCGC GATCTGGATA TTTGGGTAGA GGAAAAGGTG GCTAGAGGTT GTGACCTTTA TTTACAACTA TTGCCCCAAT TTCCCACAAC TGTACAAAAT TTTGCTCAAC ATCAACCTCT ATTTTGGGAT GAAAAAGTCA AACCACGTGT ACTGAGGCGA TCGCCCGGAA AATTGCCAGA CAAAGAATTA CCTTATATCC TTATTGCAGA CAAGGATACT GATTTGAGAC AATACATTAT TAATCAAGAT AATTCTGTTC TTATCTTACT GCCGGAACAA CCAGGAAAAA CATCACAGGA ATTAGATTTT GCTTATACTG AAACATACCT TCTCACTGAT CATTGTGATG GACTTGGTAC AACACAGTTA ATTCATAACT TACGTCCTCA ACATGTCATT TTTGTTAATG GCTCTCCTAG TTATTTAGCT GACTTAACTA ACCTTGAAGA GTTACGCAAC CGTTATCAAT TACACTCTCC AGCTAATGGT ACATTAGTAG ATTTACCAAT AGGTGAGACG TTTATAGTAC CTACATCACT AGAAACTAAT TATGAAGGGG AATTAAATGA ATTAAACACA GAGGTAATAA TTTCTTTACC TCAAAGCATT ACAAATGATA GTCGTTGGTC AACTTTCTCT GATACAGGTC TTGTAGAAGT TCGTTGGCAA GGAGAAGAGC TAGTTGTTAG AGGAATATCT CAACGAGAAC TTCTTAGTCA AACCACTGAC CGCTTGAGCT CTCCTGATTT AAATTGTTGT GGTAATTGTT TACATTACCG AGGACAACGT TGTTCTAATC CTGTTTCAGC TTTATATGGC TTTAAGGTAA CATTTGATGG ATATTGTCCC ATGTTTGAGT CAGTTCATTT TCATTTTCCT TCTACTGAAG AAACAGATAA AACTAACTAG
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Protein sequence | MINLECLAYS VGHADDGICL LVRIGIHRIL LDCGITNISL LTNETKQQLP ADIVLCSHAH SDHAQGLLAL HRSFPDLPIY ASEATTKLLP LNWPELTICE VPDFCQPLPW HSPIELCSGL TVELFPAGHL PGATAFLLTY TQGNRTYKLL YTGDFFLSKS RLVEGLPLAY LRGLKLDVLI VEGSYGTAHY PHRRQLENNL AERIYEAIAF GTSVILPTPP LGLGQELLML LRSHHYFTGR DLDIWVEEKV ARGCDLYLQL LPQFPTTVQN FAQHQPLFWD EKVKPRVLRR SPGKLPDKEL PYILIADKDT DLRQYIINQD NSVLILLPEQ PGKTSQELDF AYTETYLLTD HCDGLGTTQL IHNLRPQHVI FVNGSPSYLA DLTNLEELRN RYQLHSPANG TLVDLPIGET FIVPTSLETN YEGELNELNT EVIISLPQSI TNDSRWSTFS DTGLVEVRWQ GEELVVRGIS QRELLSQTTD RLSSPDLNCC GNCLHYRGQR CSNPVSALYG FKVTFDGYCP MFESVHFHFP STEETDKTN
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