| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3992 |
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| Symbol | |
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| ID | 4244558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6169488 |
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| End bp | 6170168 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638108906 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_723488 |
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| Protein GI | 113477427 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.280022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.135282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT TAATTGTAAT TACAGGGATA AGTCGAGGCT TAGGTAGAGC GATAACCGAA
GAATTTATTA ATTTAGGCCA TACTGTTATT GGTTGCGCTC GTTCTAAATC TGCTGTGGAA
AATTTAACTC ATAAATATTC TAATTCACAT CAGTTTAGTT GTGTGAATGT AGCAGATGAA
AATAATGTGC AAGAGTGGGC AAAGTATACA CTGGCTAATT ATTCAGCGCC AGATTTATTA
ATAAATAATG CAGCTATAAT TAATCAACCT GCACCTCTTT GGAAAGTTGA TAGTGAGGAA
TTTTCCCAAT TAATTGATAT TAATATTAAA GGTGTGGTAA ATGTGATACG TTATTTTGTG
CCAGCTATGA TTTCTAGGGG AAGTGGTATT ATTGTTAATA TTAGTTCTGG GTGGGGACGT
TCCAGTTCTC CACAAGTAGG GCCTTATTGT GCTTCTAAGT GGGCTATTGA AGGTTTGACT
GGTGCTTTAT CTCAGGAGTT ACCGAACCCA ATAGCTGCTA TTGCTCTTAA CCCAGGAATT
ATTCATACTG ATATGTTAGA TATTTGTTTT GGAGAGGATG CAAAATCTTT TACTTCTGTT
AAATCTTGGA CAAAAAAAGC TGTTCCTTTT TTATTAAATC TAAAGCCAGA GGATAACGGA
ATACCTTTAA CTATATCTTA A
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| Protein sequence | MKKLIVITGI SRGLGRAITE EFINLGHTVI GCARSKSAVE NLTHKYSNSH QFSCVNVADE
NNVQEWAKYT LANYSAPDLL INNAAIINQP APLWKVDSEE FSQLIDINIK GVVNVIRYFV
PAMISRGSGI IVNISSGWGR SSSPQVGPYC ASKWAIEGLT GALSQELPNP IAAIALNPGI
IHTDMLDICF GEDAKSFTSV KSWTKKAVPF LLNLKPEDNG IPLTIS
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