Gene Tery_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3950 
Symbol 
ID4244033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6107560 
End bp6107982 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content34% 
IMG OID638108869 
ProductTPR repeat-containing protein 
Protein accessionYP_723451 
Protein GI113477390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.174143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0678057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGA CACCAGAAGA ACTATATAAA GAAGGGCTAG AAAGATATAA AGCTGGAGAA 
AAGGCAGGTA CTTTAATTCC ACTATTTAAA GAAATTACAG ATCGCTCTCC TAAAAGTAGT
AGTAGTTGGA TTAGTTTATC GTGGTTATAT TTATTAGAGA AAAAACCTAA ATCAGCTCAT
AAAGCAGCTA AGGAAGGATT TAAGCTTAAC CCAGACGATC CACAGGGGAG AATTAATTTG
GCTTTAGCAA TGTTAGAAAT AGAAAAAAAG GGTGTTAGAC CTCATGTAGA GAAAGCCCAA
CAATTGATTA TGGCTGATGA AGATTGGCTC AAAGAAATTA AAAATAATAT TAAGGATGGT
TTTGATAGAA GAGGTGAATG GCCAGCACTG GCTCGAATTA AACAATGGTT ATTTGATATT
TAA
 
Protein sequence
MTKTPEELYK EGLERYKAGE KAGTLIPLFK EITDRSPKSS SSWISLSWLY LLEKKPKSAH 
KAAKEGFKLN PDDPQGRINL ALAMLEIEKK GVRPHVEKAQ QLIMADEDWL KEIKNNIKDG
FDRRGEWPAL ARIKQWLFDI