| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3748 |
|---|
| Symbol | |
|---|
| ID | 4243696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5749799 |
|---|
| End bp | 5750809 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638108689 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_723273 |
|---|
| Protein GI | 113477212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.426365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA CATTATTTAG CTGGTGTAAA AATTTTCCAG TATTGAAGAA AATATCAGTT
TTTTATAGTG TAACTTTAGT TGGTTTCAAC TTTTGGGTAA CTCCAGCTAT AGGAGATCCA
TTTCGTAAAA TAAATCCTAT TGAAATAGGA GAAAAAACCG AAGCAGCTTT TGAAGCTATG
TTTGAAGAAG GAAATTATAA AGAAGCAAGA GACTATCTTA AAATAGCTGA ATGTGAAGAG
ATAGGTGAGC CTCTTATTTA TGCTATGATT TCTTCCTTGC ATTACTTAGA TAAAAATTGG
GATTCACTAA AATTATATGC TCAAAAAACT ACTGAGGTAG CAGAAAATTT AATTGCAATT
GATCCAGTTC GTGGTAATAT TTATGCTGCA ACAGGTTACT TTCTAGAAGG TGCTTATATT
ATATCTACTG AAGGTACATT AAAGGGAGCC CCAAAAGCTT TAGAAAAACT TAGAAAAGTT
TTGAGTCATT TTGAGTCAGC AGAAAGAATA AATTCATCGG ACCCAGAGTT AAATTTGCTC
AAGGGATATA TGGATTTAAT GTTAGCAGTA AATTTGCCAT TTTCTGACAT TAGTAAAGCA
ATAGAAATAT TAGAAAATAA AGCTTATCCT CATCATTTAG CTTATCGGGG ATTGGCAGTA
GCTCATCGAG ATTTAGATGA TTTCAAAAAA GCTCTACAAT ATGTAGATAA AGCTTTGTCA
GAAGTTCCAG AAAATCCAGA GGTACATTAC CTAAAAGCAC AAATTTTAGT TGCTCAGGCT
CGGGAGAAAG ATAACAATTT ATCTCTTAGA AAAAAAGCTA AAAAAAACTT TGATAAAGCT
TTGGCAAAGT CAGAACAAAT GCCGAGACGT TTGGTAGCAC AAATATTTTT TGAACAATGT
AAAAATATTA ATAATATAGA TGATAGAAAA CGAAGTTGTG ACTCAATGCG AGATATAATT
AGAGATGGTT CAGGTACATG GGGGCCTCAA GAGTTACCAG CTCTTCGCTA A
|
|---|
| Protein sequence | MLKTLFSWCK NFPVLKKISV FYSVTLVGFN FWVTPAIGDP FRKINPIEIG EKTEAAFEAM
FEEGNYKEAR DYLKIAECEE IGEPLIYAMI SSLHYLDKNW DSLKLYAQKT TEVAENLIAI
DPVRGNIYAA TGYFLEGAYI ISTEGTLKGA PKALEKLRKV LSHFESAERI NSSDPELNLL
KGYMDLMLAV NLPFSDISKA IEILENKAYP HHLAYRGLAV AHRDLDDFKK ALQYVDKALS
EVPENPEVHY LKAQILVAQA REKDNNLSLR KKAKKNFDKA LAKSEQMPRR LVAQIFFEQC
KNINNIDDRK RSCDSMRDII RDGSGTWGPQ ELPALR
|
|---|
| |