Gene Tery_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3558 
Symbol 
ID4244307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5474963 
End bp5475748 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content38% 
IMG OID638108527 
Producthypothetical protein 
Protein accessionYP_723116 
Protein GI113477055 
COG category[S] Function unknown 
COG ID[COG1836] Predicted membrane protein 
TIGRFAM ID[TIGR00297] conserved hypothetical protein TIGR00297 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.523152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCTA ATATTAATTC TGTAAATCCC TGGTTAGTAG CTATACTTTT AAATATTATT 
TTACTTAGTC TAGTTTATTT CGCTCCCAAA AAATTATTGA CTCCCTGGGG AATAGTTCAT
GCTTGGATAT TGGGAGTTTT AATTTGGGGT AGTTTGGGTT GGCCTGGATA TGCGGTAGTG
GTGTTTTATT TTTTGGTTGG TTCTGGGGTG ACTCGCATTG GAATGGCCGA AAAGCAAGCC
GCTGGAATTG CAGAAAAGCG GGAAGGTGCT AGAGGACCAG AAAATGTTTG GGGTTCGGCT
TTGACTGCTG CTATCTGTGC TATGGGAGTT TGGGTCATTG GTCTGTTATA CCCGAATAAT
TTTCCTATAG AAAATTTACC ATTGTTACTA ATGTTAGGTT ATGTAGCTAG TTTTAGTACT
AAGCTTTCTG ATACTTGTGC TAGTGAGGTA GGGAAAGCTT ACGGTCAGCG GACTTTTTTA
ATTACAACTC TACAACCAGT GCCACGGGGA ACTGAGGGTG CTGTAAGTTT AGAGGGGACT
TTAGCAGGTG TTGTGGCTTC TTTTGCGATC GCTGTAGTTG GTTGGACTGT AGGTTTAATT
GATTTGACAG GAATAGTCTT TTGTGTTATT TCAGCTTTTA TTGCTACTAA TTTGGAGAGT
TTAATTGGAG CAACAATGCA GTCTCAGTTT GAATGGTTAA CAAATGAAGT TGTAAATATT
ATCAATACTT CAATTGGAGC GATCGCTGCA ATTGTATTAG CTATAGTTTG GTTTAATAAA
TATTAA
 
Protein sequence
MLSNINSVNP WLVAILLNII LLSLVYFAPK KLLTPWGIVH AWILGVLIWG SLGWPGYAVV 
VFYFLVGSGV TRIGMAEKQA AGIAEKREGA RGPENVWGSA LTAAICAMGV WVIGLLYPNN
FPIENLPLLL MLGYVASFST KLSDTCASEV GKAYGQRTFL ITTLQPVPRG TEGAVSLEGT
LAGVVASFAI AVVGWTVGLI DLTGIVFCVI SAFIATNLES LIGATMQSQF EWLTNEVVNI
INTSIGAIAA IVLAIVWFNK Y