| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3531 |
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| Symbol | lspA |
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| ID | 4244357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 5443751 |
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| End bp | 5444248 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638108503 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_723092 |
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| Protein GI | 113477031 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.331407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTTAAAGT TGAAATTACG TTTTAAAAAA AATTCCTTAT TCTGGATAGT TGCTATTATC
AGCATTATTT TAGACCATTT GACTAAATTT TGGGTGGTAC AAAATTTTCA ATTAGAAGAA
AGTATGGTTT TATGGCCTGG TGTATTTAAC TTTACTTATG TAACTAATAC TGGAGCAGCT
TTTAGTCTGT TTAGTAATGG TGGAGTTTCT TGGTTGCGCT GGTTATCTTT AATAGTTAGT
CTAGGTCTCA TGGGTTTTGC TTGGTTTGGA CCGAAGTTTG ATAGATGGGA ACAACTAGGT
TATGGTTTAA TTTTAGGAGG AGCATTGGGT AATGGTATTG ATAGGTTTGT TTCTGGTTAT
GTCGTTGACT TTTTGCATTT TAGCCTTATA AATTTTCCTA TTTTTAATGT GGCAGATGTT
TCTATTAATA TTGGTATTAT TTGCTTACTA GTTGCTACAT TTTTTGCTGA AATACCTAAG
TTAGGTAATA AAAAATAA
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| Protein sequence | MLKLKLRFKK NSLFWIVAII SIILDHLTKF WVVQNFQLEE SMVLWPGVFN FTYVTNTGAA
FSLFSNGGVS WLRWLSLIVS LGLMGFAWFG PKFDRWEQLG YGLILGGALG NGIDRFVSGY
VVDFLHFSLI NFPIFNVADV SINIGIICLL VATFFAEIPK LGNKK
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