| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3430 |
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| Symbol | |
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| ID | 4243373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5247102 |
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| End bp | 5249225 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638108406 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_722996 |
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| Protein GI | 113476935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGTAC CTCTTTGGCC TGGAAAACCA TATCCCTTAG GATCATCCTG GAATGGTAAA
GGCACTAACT TTGCTATATT CTCTGAAAAT GCTACTAGCG TAGAGCTTTG CCTATTTGAC
AAGCAAAACA AAGAAACACG GCTCACTTTA ACAGAAGTTA GTAACTTTAT CTGGCACGGC
TATCTACCAG GCATAAGTCC CGGCCAAAAA TATGGATTTC GAGTACATGG TCCCTACGAA
CCATCCCAAG GCCATCGGTT TAACCCGAAT AAATTACTAA TTGACCCTTA CGCAAAAGCA
ATAGATGGGA ATATACTCTA CGGTCAAGAA ATATTTGCCT ATTCTTGGGA TAATCCAGAA
AAAGACTTAG TCTGTATATT AGACGATGAT GCTCATCTAA TGCCAAAATC TGTGGTAATA
GATGAAAGTT TTGATTGGGG AGATGACAAA TTATTAAATA TTCCTAACCA CGAAAGTGTA
ATTTACGAAA TTAATCTTAA AGGGTTTACA AAACTACATC CTGAAATTCC AGAAAATTTG
AGAGGTACTT ATGCTGGGTT GGCGCATCCT ACGGCGATCG CTTATCTTCA GTCTCTAGGT
ATTACAGCAG TAGAGCTAAT GCCAATACAT CATTTTCTCC GATACCCAGG GCATTTAGTT
GATAAGGAAC TATCTAATTA TTGGGGTTAT GACTCAATTA ATTATTTTGC TCCCTATAGT
GGCTATAGTT CTAGCAGTAA AGCAGGGGGG CAAGTTAGAG AATTTAAACA AATGGTGAAG
GCATTGCACA ATGGTGGTAT TGAAGTAATA TTAGATGTAG TTTATAACCA TACTGGAGAA
GGCAATCATC TGGGTCCAAC TTTATCCTTT AAAGGTATTG ATAATGCCGC TTATTATCGC
CTAGTAGAAG ATGACCCCCG CTACTATATG GACTTCACTG GTTGTGGTAA TTCTCTCAAC
GTTCGTCACC CCCAAATATT AAAATTAATT ATGGATAGTC TGCGCTATTG GGTGACGGAA
ATGCATGTTG ATGGTTTTCG ATTTGATTTA GCTTCAGCTT TAGCGCGAGA ATTATATGAA
GTAGATAGTT TGGCAGCTTT TTTTGATATT GTTCATCAGG ACCCGGTTAT TTCAAACGTG
AAATTAATTG CTGAACCTTG GGATGTGGGA GAAGGTGGTT ATCAAGTTGG TAATTTTCCT
CTATTGTGGT CAGAATGGAA TGGTAAATAT AGAGATACAG TTAGAGATTT TTGGCGAGGG
GAAAAGGAAA CATTAGCTGA ATTTGCTTAT CGTTTTACGG GTAGTTCTGA CTTATATGCT
TCTAATGGTA GGTTGCCTCA TGCGAGTATT AATTTTGTAA CTGCTCATGA TGGTTTTACT
TTAAATGATT TAGTTAGTTA TAACGAGAAA CATAATGAGG CAAATGGGGA GGATAATAAT
GATGGAGAAA AACATAATCG TTCTTGGAAT TCTGGAGAAG AAGGAGAAAC TAATGACCCG
GAAATACTAA GTTTAAGAAA CCGTCAAAGA CGTAATTTTT TAGTAACTTT AATGTTGTCT
CAAGGTGTAC CTATGTTGTT AGGTGGGGAT GAATTTGGTC GAACACAAAA AGGTAATAAT
AATGCTTATT GTCAGGATAA TGAAATTTCT TGGGTAAATT GGAATTTACA AGTAGAAAAT
TTAGATTTAT TAGATTTTAC TAGGGAATTA ATTTATTTTC GTTTTCAACA TCCAGTATTT
TATAGACGTA AGTGGTTTCA AGGTCGTGCT ATTCATGGTT CGGATGTGAG TGATATAGGT
TGGTATAATC CTGATGGTGG AGAAATGACT GAAGAACAAT GGAATATTGA TTTTGCTAAA
GCTGTTGGCA TCTTTTTAAA TGGAGAGGAA ATTCCTGCTA GTGGTAGGCG TGGGGAAAGA
ATTATTGATG ATAGTTTTAT GATTTTTTTT AATGCTCATT ATGAATTAAT AGAATTTACG
ATTCCTCCTA GGTTTCAAGA TAGAAATTGG GTAATTATTA TTGACACGAG TAAGTCTGCT
TTTGTAGAAA ATGGTAAGTA TTATAAAGGT AAAATTCTTG TTCCTGTTAT GGAACATTCA
ATTGTTGTTT TACAGCTTTT ATAA
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| Protein sequence | MYVPLWPGKP YPLGSSWNGK GTNFAIFSEN ATSVELCLFD KQNKETRLTL TEVSNFIWHG
YLPGISPGQK YGFRVHGPYE PSQGHRFNPN KLLIDPYAKA IDGNILYGQE IFAYSWDNPE
KDLVCILDDD AHLMPKSVVI DESFDWGDDK LLNIPNHESV IYEINLKGFT KLHPEIPENL
RGTYAGLAHP TAIAYLQSLG ITAVELMPIH HFLRYPGHLV DKELSNYWGY DSINYFAPYS
GYSSSSKAGG QVREFKQMVK ALHNGGIEVI LDVVYNHTGE GNHLGPTLSF KGIDNAAYYR
LVEDDPRYYM DFTGCGNSLN VRHPQILKLI MDSLRYWVTE MHVDGFRFDL ASALARELYE
VDSLAAFFDI VHQDPVISNV KLIAEPWDVG EGGYQVGNFP LLWSEWNGKY RDTVRDFWRG
EKETLAEFAY RFTGSSDLYA SNGRLPHASI NFVTAHDGFT LNDLVSYNEK HNEANGEDNN
DGEKHNRSWN SGEEGETNDP EILSLRNRQR RNFLVTLMLS QGVPMLLGGD EFGRTQKGNN
NAYCQDNEIS WVNWNLQVEN LDLLDFTREL IYFRFQHPVF YRRKWFQGRA IHGSDVSDIG
WYNPDGGEMT EEQWNIDFAK AVGIFLNGEE IPASGRRGER IIDDSFMIFF NAHYELIEFT
IPPRFQDRNW VIIIDTSKSA FVENGKYYKG KILVPVMEHS IVVLQLL
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