Gene Tery_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3298 
SymbolanmK 
ID4243604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5058586 
End bp5059836 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content37% 
IMG OID638108288 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_722879 
Protein GI113476818 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00913494 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAAGG TTATTGGTTT GATAAGTGGT ACTTCCGTAG ATGGTATAGA TGCAGCTTTG 
GTTGATATTA CTGGAAGTCA AACAAATTTA ACAGTTGAAT TACTCACAGC ACTTACTTAT
CCCTACCCAG ATAATTTGCG ATCGCAAATT CTTGATATTT GTTCCGGTGC ATCTATCTCA
ATAGCTGAGT TAGCTGAACT TAATGATACT ATTGCTCAAG AATTTGCGAC GGCAGCATTA
ATAATTAACC AGAAATATGC TGTGAATGCA GAACTAATTG GCTCTCACGG TCAAACTGTG
TATCATCGTC CACCATCTCA ACAATTAGGC TATAGTCTAC AGTTAGGTCG TGGTGAGGTT
ATTGCTAATT TAACTGGAAT TACTACCATT AGTAATTTTC GGGCTGCTGA TATTGCAGCC
GGAGGTCACG GTGCCCCCTT AGTTCCTTGT GTTGATGTTC ATTTACTGGG TCACCCAAAA
TATACTCGAT GTGTACAAAA TTTAGGTGGA ATTGGTAATG TGACTTATCT AAAAAATCAA
CCCTTTTGGG GAAGTCAAAA TTCAATCCCC CCTTTACCTG TTTATATGGG GAAAGTCAAA
AGTAAAAAAA AAGAGGAATT AGTAACAACC TTAGCTGATA CTCAAGGAGT TTTAGGTTGG
GATACAGGAC CGAGTAATAC ATTATTAGAT TTAGCAGTAC AACAGCTTTC TCAAGGAAGT
AAAACCTACG ACAAAAATGG AGAATGGGCA GCTACTGGCA GACCATGCCA AGAGTTAGTA
GAAATATGGT TAAAACAAGA CTTTTTTCAA CAGAAACCCC CAAAGTCTAC GGGACGAGAA
TTATTTGGTA AGGACTATTT ATTAAAATGT TTTAGTGATG GGGAAAAATA TCATTTAAGT
GCTTCTGATA TATTAGCAAC TCTCACAGAA TTAACAGCAG CTTCAATTAA TCATAGCTAT
AGAAATTTCT TACCAAATTT GCCAGACCAA ATATTATTAT GTGGCGGTGG TAGTCATAAT
TTATATTTAA AAAAACGGAT AGAGAATTTA TTAGCACCAA TACCGGTAAT GACCACTGCT
GAAGTAGGTA TAGATGTAGA TTTTAAAGAA GCGATCGCTT TTGCAATTTT AGCTTATTGG
CGTTCCTTAG AAATTCCCTG TAATTTGCCA GAAGTTACAG GAGCAAAATC TCAAGTTATG
TTAGGGGAAA TTCATCAACC AATTACAAGG AATAAGGGAA TAGCAGAATA G
 
Protein sequence
MTKVIGLISG TSVDGIDAAL VDITGSQTNL TVELLTALTY PYPDNLRSQI LDICSGASIS 
IAELAELNDT IAQEFATAAL IINQKYAVNA ELIGSHGQTV YHRPPSQQLG YSLQLGRGEV
IANLTGITTI SNFRAADIAA GGHGAPLVPC VDVHLLGHPK YTRCVQNLGG IGNVTYLKNQ
PFWGSQNSIP PLPVYMGKVK SKKKEELVTT LADTQGVLGW DTGPSNTLLD LAVQQLSQGS
KTYDKNGEWA ATGRPCQELV EIWLKQDFFQ QKPPKSTGRE LFGKDYLLKC FSDGEKYHLS
ASDILATLTE LTAASINHSY RNFLPNLPDQ ILLCGGGSHN LYLKKRIENL LAPIPVMTTA
EVGIDVDFKE AIAFAILAYW RSLEIPCNLP EVTGAKSQVM LGEIHQPITR NKGIAE