Gene Tery_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3283 
Symbol 
ID4243589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5040182 
End bp5040490 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content35% 
IMG OID638108277 
Product50S ribosomal protein L25 
Protein accessionYP_722868 
Protein GI113476807 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.228774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.044405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTA CAGTAGAATG TCAAAAAAGA CCATTAGGAA GCAAAACTAA AGCTTTACGA 
AGGGAAGGAT TAATTCCTGC AGTATTGTAT GGTCATCAGC TTACAGAATC AGTTTCATTA
ACAATTGATA TTAAGGAAGC GCAGCAGTTG TTAAAAAATG CTTCTACGAA TAAGACTGTT
ATTGATCTTA AAGTTCCTGA GATTTCTTGG AATGGTAAAA CTCTTCTTAG GGAAGTTCAA
TATCATCCCT ATAAATCTGA GATTTACCAC CTGAGCTTTT TCTCCATAAG CGATCGCGGA
GATACTTAA
 
Protein sequence
MEVTVECQKR PLGSKTKALR REGLIPAVLY GHQLTESVSL TIDIKEAQQL LKNASTNKTV 
IDLKVPEISW NGKTLLREVQ YHPYKSEIYH LSFFSISDRG DT