Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3254 |
Symbol | |
ID | 4243675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4991854 |
End bp | 4992558 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638108250 |
Product | peptidase M23B |
Protein accession | YP_722841 |
Protein GI | 113476780 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGTTC CTGGAAAAAA ACTCTTATAT AAATTCCCTA TAGCCTTAAA ACAGGGTTTA CGTCACCCCC AAAAACAAAA AAAAATATTA CTATTAGGAT TTATGGCACT TGGTATAGCC ACCTTAGGAA TTAAACAAGA ATTAGTCAAA GCACAAGGAG TCAAAACTAC CAATCAACAA ATATCATACA TTAAAAACTG GCAAAATGCC TCTTTCCCCG TAGAAAACTT TCAAGGATAC ACATCAGCTT TTGGTCCTCG TGGTAGAGGT TTTCATTATG GGTTAGACTT AGCAGCTCCC CAAGGAAGCT ATATCCGAAG TTGGTGGACC GGCACAGTGA TGGAAGTTTG GGAAGATCGT CGTTGCGGTA CTGGTATTAT AATTAAGTCA GGTTCTTGGG AACACGTTTA CTGTCACGTT CAAGGAAAAG TAGAAACTCA CAATGGACAT CGCTATCTAA TAGATCGTGG TGGTGGAATT ATGCTACCTC AAGGTCAAGT TTTGCCTGCT GGGAGTCGAA TAGCTAGAGT CGGAATGACT GGTAGAACCA GTGGCCCCCA TCTTCATTGG GGTTTGAAAT ATGGAGGACG TTGGGTAGAC CCTGCTTTGA TTTTGCGAGA AATGTATACT CAACAAACTA AACAGTTATC AAGCTTAGAA CATAGATATA GTGCTAAGTA CAACTCACAC GCAAGCTATA ACTAA
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Protein sequence | MLVPGKKLLY KFPIALKQGL RHPQKQKKIL LLGFMALGIA TLGIKQELVK AQGVKTTNQQ ISYIKNWQNA SFPVENFQGY TSAFGPRGRG FHYGLDLAAP QGSYIRSWWT GTVMEVWEDR RCGTGIIIKS GSWEHVYCHV QGKVETHNGH RYLIDRGGGI MLPQGQVLPA GSRIARVGMT GRTSGPHLHW GLKYGGRWVD PALILREMYT QQTKQLSSLE HRYSAKYNSH ASYN
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