Gene Tery_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3254 
Symbol 
ID4243675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4991854 
End bp4992558 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content40% 
IMG OID638108250 
Productpeptidase M23B 
Protein accessionYP_722841 
Protein GI113476780 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTTC CTGGAAAAAA ACTCTTATAT AAATTCCCTA TAGCCTTAAA ACAGGGTTTA 
CGTCACCCCC AAAAACAAAA AAAAATATTA CTATTAGGAT TTATGGCACT TGGTATAGCC
ACCTTAGGAA TTAAACAAGA ATTAGTCAAA GCACAAGGAG TCAAAACTAC CAATCAACAA
ATATCATACA TTAAAAACTG GCAAAATGCC TCTTTCCCCG TAGAAAACTT TCAAGGATAC
ACATCAGCTT TTGGTCCTCG TGGTAGAGGT TTTCATTATG GGTTAGACTT AGCAGCTCCC
CAAGGAAGCT ATATCCGAAG TTGGTGGACC GGCACAGTGA TGGAAGTTTG GGAAGATCGT
CGTTGCGGTA CTGGTATTAT AATTAAGTCA GGTTCTTGGG AACACGTTTA CTGTCACGTT
CAAGGAAAAG TAGAAACTCA CAATGGACAT CGCTATCTAA TAGATCGTGG TGGTGGAATT
ATGCTACCTC AAGGTCAAGT TTTGCCTGCT GGGAGTCGAA TAGCTAGAGT CGGAATGACT
GGTAGAACCA GTGGCCCCCA TCTTCATTGG GGTTTGAAAT ATGGAGGACG TTGGGTAGAC
CCTGCTTTGA TTTTGCGAGA AATGTATACT CAACAAACTA AACAGTTATC AAGCTTAGAA
CATAGATATA GTGCTAAGTA CAACTCACAC GCAAGCTATA ACTAA
 
Protein sequence
MLVPGKKLLY KFPIALKQGL RHPQKQKKIL LLGFMALGIA TLGIKQELVK AQGVKTTNQQ 
ISYIKNWQNA SFPVENFQGY TSAFGPRGRG FHYGLDLAAP QGSYIRSWWT GTVMEVWEDR
RCGTGIIIKS GSWEHVYCHV QGKVETHNGH RYLIDRGGGI MLPQGQVLPA GSRIARVGMT
GRTSGPHLHW GLKYGGRWVD PALILREMYT QQTKQLSSLE HRYSAKYNSH ASYN