Gene Tery_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3106 
Symbol 
ID4244197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4757984 
End bp4759504 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content35% 
IMG OID638108119 
Producthypothetical protein 
Protein accessionYP_722712 
Protein GI113476651 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC AAGAAATTCC TTGGGTTATT GCTCAAGCTG GTGGAAAAGG AACACGCTTA 
AAACACTATA CGTGGAATAA GCCCAAGTGT CTACTCTCAA TTGCTTCTCA GCCACTTTTA
TATCATTTGT TTTCTCATTT TCCAGACTCT AACTTTCTCG TTATAGGGGA TTACAGTTAC
GAAGTCTTAG ACAAATATCT GCAAGTTTTT CCACCTAAAG TTTCTGTCCA GTTAATACAA
GCAAAAACTA AAGGAACAAT ATCTGGAATT GATCAAGCCT TAAGCTATAT TCCAGAAAAT
AATCCATTCT TATTAGTCTG GTGTGACTTA CTGTTTGAAG ATATTCCTGA TTGTAAAATT
GAAGGAAAAA ACTGGATTGG TTTGAGTCGT TCTTTCCCAT GTCGCTGGTC TTATGATGAT
ACTGGAAATT GTTTGGAGGA AGCCTCAAGC GAGCGAGGAA TTGCAGGATT CTTTGTCTTC
CATAATAAAA CCGTTCTGAA AGATATTCCT TCATCAGGGG AATGTGTCCG TTGGTTCGCT
CAAAAATCTA TACAGTTTAA TGAGCTTTTT CTAGATCATA CCTATGAGTT CGGGACTCAG
GAGCATATTG CAGAATATCA AAAACAAAGG CCTGTTAATC GCTTTTTTAA CTCTGTTGAG
ATCGTAGGAG ATCAAGTAAT CAAAAAAGCA CGAATCCCAG AATTTGAGAC ATTAATTGAA
AGGGAAATTA ATTGGTATCG TAATGCTCAC TCATTAGGGT TTAATCATTT GCCCACCCTA
ATTTCTGACC AGCCAATGAC TATTTCTAGA ATTACAGGAG TACATCCTTT TGAATTAGAA
GTCAGCTATC AACAAAAAAG AGAAATTCTG AGTGATATTT TTCAAACTTT AAATAAGCTT
CATAGTTGTG ATCGAAAACA GGCTAATGCT AAAACTTTGA TCGAAGTTTA CCTTCAAAAA
ACTTATAACC GTGTTAATAG TGTTGCTCAA CTAATTCCTC ATTTTGAAAA ACCAACGATT
CAAGTGAATG GTTGTCTATG TCGCAATCCC TTTCATTCTC AGTATGAAAA TTTAATTTCT
CAATTAGTTG CCGAAATTCA AGTTGATAAC TTTATGCTAA TTCATGGTGA TCCAACCTTT
TCTAATATAC TTGTTGACAA TCAAGACAAA GTTTGGCTAA TTGATCCAAG GGGTTATTTT
GGCTCAAGTT GGCTCTATGG TGATCCTCTG TATGACTGGG CAAAATTATA CTATTCAGTT
GTAGGAGACT ATGATTCTTT TAATCGTCGG CGTTTCCAGC TTAAGATTAT TGACCAGCAA
GTTGATATTA GTATCGAAAG CAATGGTTGG CAAGATTTGG AGTCAATGTT TGTAGAAAAA
TTTGCCAATC AAATCTTTGT TATTAGGCTA TTGCATTCCC TAATTTGGCT ATCACTATCA
GGCTATGTTA AAGACGATTA TGATTCAATT TTAGCGAGTT TTTATAATGG ATTATTTTGG
TTGGAGGATG TGCTAAAATG A
 
Protein sequence
MKLQEIPWVI AQAGGKGTRL KHYTWNKPKC LLSIASQPLL YHLFSHFPDS NFLVIGDYSY 
EVLDKYLQVF PPKVSVQLIQ AKTKGTISGI DQALSYIPEN NPFLLVWCDL LFEDIPDCKI
EGKNWIGLSR SFPCRWSYDD TGNCLEEASS ERGIAGFFVF HNKTVLKDIP SSGECVRWFA
QKSIQFNELF LDHTYEFGTQ EHIAEYQKQR PVNRFFNSVE IVGDQVIKKA RIPEFETLIE
REINWYRNAH SLGFNHLPTL ISDQPMTISR ITGVHPFELE VSYQQKREIL SDIFQTLNKL
HSCDRKQANA KTLIEVYLQK TYNRVNSVAQ LIPHFEKPTI QVNGCLCRNP FHSQYENLIS
QLVAEIQVDN FMLIHGDPTF SNILVDNQDK VWLIDPRGYF GSSWLYGDPL YDWAKLYYSV
VGDYDSFNRR RFQLKIIDQQ VDISIESNGW QDLESMFVEK FANQIFVIRL LHSLIWLSLS
GYVKDDYDSI LASFYNGLFW LEDVLK