| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2938 |
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| Symbol | |
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| ID | 4245280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4564109 |
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| End bp | 4566127 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638107978 |
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| Product | DNA-directed RNA polymerase subunit gamma |
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| Protein accession | YP_722575 |
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| Protein GI | 113476514 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02387] DNA-directed RNA polymerase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.942485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC TTGAACAAAG ATTCGATTAT GTGAAAATTG GGTTAGCTTC TCCAGACAGA
ATTCGTGGAT GGGGAGAAAG AACTCTGCCA AATGGTACTG TGGTAGGAGA AGTAACTAAA
CCAGAAACTA TCAATTACCG GACTCTAAAA CCAGAAATGG ATGGGTTATT TTGCGAACGT
ATTTTTGGTC CGGCGAAAGA CTGGGAATGT CATTGTGGAA AATATAAGCG AGTCCGACAT
CGGGGAATTG TTTGTGAAAG ATGTGGAGTG GAAGTAACTG AGTCACGGGT GCGTCGTCAC
CGCATGGGAC ATATTAAGTT AGCAGCACCA GTAACTCATG TTTGGTACCT CAAAGGTATT
CCGAGTTACA TGGCAATTTT ATTAGATATG CCATTGCGGG ATGTGGAGCA AATTGTTTAC
TTCAATGCTT ATGTGGTATT GGAACCAGGA AATCACGAAA GTTTAAGTTA TAAACAACTG
TTAAGTGAAG ATGTTTGGTT AGAAATTGAA GACCAAATTT ATAGTGAAGA TTCTGAAATA
GTAGGGGTTG ATGTTGGTAT TGGTGCTGAG GCTTTGCAGG TTTTGTTAGC AAATCTGGAT
CTAGAAGTAG AAGCGGAAAA ACTACGGGAA GAAATTGCTA ATTCTAAAGG GCAAAAACGA
GCGAAGTTAA TCAAGCGTTT ACGGGTAATT GACAACTTTA TTGCTACAGG TTCAAGACCA
GAATGGATGG TTTTGGATGC AATTCCTGTT ATTCCTCCAG ACCTACGTCC GATGGTACAG
TTGGATGGGG GTAGGTTTGC CACTAGTGAT TTGAACGATC TTTACCGACG AGTAATTAAT
AGAAATAATC GTTTGGCGAG GTTACAGGAA ATATTGGCTC CAGAGATTAT CATCCGCAAT
GAAAAACGAA TGTTGCAAGA AGCAGTTGAT GCTTTGATTG ATAATGGTCG TAGGGGTAGA
ACTGTGGTAG GTGCAAATAA CAGGCCTCTA AAATCTTTGA GCGATATTAT TGAAGGAAAA
CAGGGTCGTT TTCGGCAAAA CTTGTTAGGT AAACGGGTTG ATTATTCAGG GAGATCCGTA
ATTGTTGTTG GACCTAAGTT GGCTATTAAT CAATGTGGTT TACCACGAGA AATGGCAATT
GAGTTGTTTC AACCATTTGT GATTCATCGG TTAATTCGTC AGGGATTAGT GAATAATATT
AAGGCTGCCA AAAAACTAAT TCAAAAAGGA GACCCCAACG TCTGGGATGT ACTAGAAGAA
GTTATAGACG GCCATCCAGT AATGTTAAAT CGCGCTCCAA CTTTGCATAG ATTAGGGATT
CAAGCTTTTG AACCTATTTT AGTCGAAGGT AGAGCAATTC AGCTACATCC TTTAGTATGT
CCAGCATTTA ATGCTGATTT TGATGGAGAC CAAATGGCGG TTCATGTGCC ACTGTCTTTG
GAGTCGCAAG CGGAGGCTAG GTTATTGATG TTGGCATCGA ATAATGTTTT GTCTCCGGCA
ACTGGTCGCC CAATTATTAC GCCTTCTCAA GATATGGTGT TGGGTTGTTA TTATCTAACG
GCAGAAAACC ATAAACTCCA AGGTAGTAAA GCACTTTATT TTGCTAACCC TGATGATGTA
ATTTTAGCTT ATCAACAAGA TAAGATAGAT TTGCATACTT ATGTTTATTT GAGGTTAGCT
CCTGATGTGG AGATTGAAAC TGATAAACCA GAAGAAATAC CTCCTGATAT ACAACAAATA
TCTGATGAAC TAGTGGTTCA TACTTATTGG ATGCCATTGG ATAGTAAAGT ATTACCTAAT
ACTTTAGGAG AGTTGAAATC AGAGCAAAAG TGCGAAAATG GGGATTTGGT GAAGGCTTAT
AATCTTTATA GAATCCATTA TAGTCAAGAG GGAGAGATTA AGAAAGTTTA TATTAAATCT
CGCCAAGTTC GGCAGAGTAA TGGATTAGTG ACTACACAGT TTGTTGTGAC AACGCCTGGT
CGAATAATTA TCAATCAAAC AATTCAAAGT GTGCTTTAG
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| Protein sequence | MPKLEQRFDY VKIGLASPDR IRGWGERTLP NGTVVGEVTK PETINYRTLK PEMDGLFCER
IFGPAKDWEC HCGKYKRVRH RGIVCERCGV EVTESRVRRH RMGHIKLAAP VTHVWYLKGI
PSYMAILLDM PLRDVEQIVY FNAYVVLEPG NHESLSYKQL LSEDVWLEIE DQIYSEDSEI
VGVDVGIGAE ALQVLLANLD LEVEAEKLRE EIANSKGQKR AKLIKRLRVI DNFIATGSRP
EWMVLDAIPV IPPDLRPMVQ LDGGRFATSD LNDLYRRVIN RNNRLARLQE ILAPEIIIRN
EKRMLQEAVD ALIDNGRRGR TVVGANNRPL KSLSDIIEGK QGRFRQNLLG KRVDYSGRSV
IVVGPKLAIN QCGLPREMAI ELFQPFVIHR LIRQGLVNNI KAAKKLIQKG DPNVWDVLEE
VIDGHPVMLN RAPTLHRLGI QAFEPILVEG RAIQLHPLVC PAFNADFDGD QMAVHVPLSL
ESQAEARLLM LASNNVLSPA TGRPIITPSQ DMVLGCYYLT AENHKLQGSK ALYFANPDDV
ILAYQQDKID LHTYVYLRLA PDVEIETDKP EEIPPDIQQI SDELVVHTYW MPLDSKVLPN
TLGELKSEQK CENGDLVKAY NLYRIHYSQE GEIKKVYIKS RQVRQSNGLV TTQFVVTTPG
RIIINQTIQS VL
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