Gene Tery_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2803 
Symbol 
ID4245337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4347060 
End bp4347971 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content35% 
IMG OID638107855 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_722452 
Protein GI113476391 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.316472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAC CTACTAAACC ATATTTTCCG GTGCTTAATT CTCAGTCAAA CAATAGTATA 
AGTCAAATAT TTATTAAAAT ATTAGGCCCT TTAATTTTAT TAGGTCCGGC AGGTTTATGG
TTATTGTTTT TATTATTATT GCCAACCTTA GTAATTTTTG AGCTGAGTTT AGTAGAAAAT
ATTCGACCAG GAGATTTAGT AATTCCTGAC GGTATCGGTA ACTATTTACG AGTTTTTGAA
GCCTTGAATT TAAAGGTAAT TTGGCGTTCA ATATATTTGG CTACGGGCAC AACAATTTTA
TGTTTATTGT TAGGATTTCC TGTGGCTTAT TGGATTGCTA TAATGTCGCC AAAACATTGG
CGAAATCTAC TTTTATTGGG TTTTATTTTG CCACTTTGGA CCTCATCTTT ATTACGTTCT
TATGCCTGGA TTACAATTTT ACGCCCCACT GGTGTATTAA ATTCATTTAT TGGAATTATT
GGATTACCAC CTTTGGAATT ATTGAATCGA ACTCCGGCAG TTTTGATTGG CATGAGTTAT
AGTTATTTAC CTTATATTGT GACGGTTCTT TATGCTTCTT TGGAAAAATT AGACCGGAGA
CTATTAGAGG CATCATATGA TTTAGGTGCT ACTCCTACAC AAACTTTTTG GAAAGTGACA
GTTCCCCAAA GTTTACCTGG TATTGCTGCT GGTTCTTTAT TGGTTTTTAT TAGTTCTTTG
GGAGATTTTG TTGACCCAGA ATTATTGGGT GGCGCTTCCA GTATGACTGC CGCTAGATTA
ATTTATAACC AGTTTTTAGG AGCTACTCAA AATTGGGGTT TTGGTTCGGC TTTAAGTATG
GTTTTGATCT TAGGAGTGAG TATAGCCATT GCTCTTTTAC TAAAATTTGG TGATGGTAAA
CCCTCTAAAT AA
 
Protein sequence
MTTPTKPYFP VLNSQSNNSI SQIFIKILGP LILLGPAGLW LLFLLLLPTL VIFELSLVEN 
IRPGDLVIPD GIGNYLRVFE ALNLKVIWRS IYLATGTTIL CLLLGFPVAY WIAIMSPKHW
RNLLLLGFIL PLWTSSLLRS YAWITILRPT GVLNSFIGII GLPPLELLNR TPAVLIGMSY
SYLPYIVTVL YASLEKLDRR LLEASYDLGA TPTQTFWKVT VPQSLPGIAA GSLLVFISSL
GDFVDPELLG GASSMTAARL IYNQFLGATQ NWGFGSALSM VLILGVSIAI ALLLKFGDGK
PSK