Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2803 |
Symbol | |
ID | 4245337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4347060 |
End bp | 4347971 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638107855 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_722452 |
Protein GI | 113476391 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.316472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAC CTACTAAACC ATATTTTCCG GTGCTTAATT CTCAGTCAAA CAATAGTATA AGTCAAATAT TTATTAAAAT ATTAGGCCCT TTAATTTTAT TAGGTCCGGC AGGTTTATGG TTATTGTTTT TATTATTATT GCCAACCTTA GTAATTTTTG AGCTGAGTTT AGTAGAAAAT ATTCGACCAG GAGATTTAGT AATTCCTGAC GGTATCGGTA ACTATTTACG AGTTTTTGAA GCCTTGAATT TAAAGGTAAT TTGGCGTTCA ATATATTTGG CTACGGGCAC AACAATTTTA TGTTTATTGT TAGGATTTCC TGTGGCTTAT TGGATTGCTA TAATGTCGCC AAAACATTGG CGAAATCTAC TTTTATTGGG TTTTATTTTG CCACTTTGGA CCTCATCTTT ATTACGTTCT TATGCCTGGA TTACAATTTT ACGCCCCACT GGTGTATTAA ATTCATTTAT TGGAATTATT GGATTACCAC CTTTGGAATT ATTGAATCGA ACTCCGGCAG TTTTGATTGG CATGAGTTAT AGTTATTTAC CTTATATTGT GACGGTTCTT TATGCTTCTT TGGAAAAATT AGACCGGAGA CTATTAGAGG CATCATATGA TTTAGGTGCT ACTCCTACAC AAACTTTTTG GAAAGTGACA GTTCCCCAAA GTTTACCTGG TATTGCTGCT GGTTCTTTAT TGGTTTTTAT TAGTTCTTTG GGAGATTTTG TTGACCCAGA ATTATTGGGT GGCGCTTCCA GTATGACTGC CGCTAGATTA ATTTATAACC AGTTTTTAGG AGCTACTCAA AATTGGGGTT TTGGTTCGGC TTTAAGTATG GTTTTGATCT TAGGAGTGAG TATAGCCATT GCTCTTTTAC TAAAATTTGG TGATGGTAAA CCCTCTAAAT AA
|
Protein sequence | MTTPTKPYFP VLNSQSNNSI SQIFIKILGP LILLGPAGLW LLFLLLLPTL VIFELSLVEN IRPGDLVIPD GIGNYLRVFE ALNLKVIWRS IYLATGTTIL CLLLGFPVAY WIAIMSPKHW RNLLLLGFIL PLWTSSLLRS YAWITILRPT GVLNSFIGII GLPPLELLNR TPAVLIGMSY SYLPYIVTVL YASLEKLDRR LLEASYDLGA TPTQTFWKVT VPQSLPGIAA GSLLVFISSL GDFVDPELLG GASSMTAARL IYNQFLGATQ NWGFGSALSM VLILGVSIAI ALLLKFGDGK PSK
|
| |