| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2728 |
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| Symbol | |
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| ID | 4244993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 4226413 |
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| End bp | 4227732 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638107788 |
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| Product | homoaconitate hydratase family protein |
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| Protein accession | YP_722385 |
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| Protein GI | 113476324 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.339985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0109667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATGA CCATGGTAGA AAAAATCCTG GCCAAAGCAT CAGGAAAATC TACTGTTAAC
CCTGGAGAAA ATATTTGGGT GAATGTTGAT GTATTAATGA CCCATGATGT TTGTGGTCCT
GGTACCATTG GCATTTTCAA ACGAGAATTT GGTGAAAATG CCAAAGTTTG GGACAAAGAA
AAAATTGTCC TGATACCAGA CCACTATATT TTTACTGCCG ACGAACGGGC AAACCGCAAC
GTAGATATTT TGCGAGACTT TGCCCAAGAA CAAAACATCA AATATTTCTA CGACATTATT
GAACGGTCAA ACTTCAAAGC CAACCCAGAC TACAAAGGAG TTTGCCATGT AGCCCTGGCC
CAAGAAGGTC ATACTCGTCC GGGAGAAGTC CTATTTGGTA CTGACTCCCA CACTTGTAAC
GCAGGAGCTT TTGGAGAATT TGCTACAGGT ATCGGTAATA CAGATGCTGC CTTTATTGCA
GGTACAGGCA AACTATTGGT CAAAGTGCCA GCAACTATGC GCTTTATCTT GAATGGGGAA
ATGCCCAATT ATTTATTAGC AAAAGATTTG ATACTTCAAA TTATTGGAGA TATTTCTGTA
TCAGGTGCTA CTTATAGAAC AATGGAATTT GCTGGGGAAA CTGTTGGACA AATGACCATG
GAAGAACGGA TGACCCTATG CAATATGGTT ATTGAAGCGG GGGGTAAAAA TGGAGTTATT
GCTCCCGATG AGATGACCTT TGAATATTTG CGGGGTAGAA CCGATAAACC ATTTGAGTCA
TTTTATTCTG ATAAAAATGC CGAATTTTAT AGCGATCGCT CCTATGATGT CACAAAATTA
GAACCTGTAG TAGCTAAACC CCATTCTCCA GATAATAAGG AACTTGCCCG TAACTGTCAG
GATGTTAAAA TTGACCGAGT TTATATTGGT TCCTGTACTG GAGGAAAAAC TTCTGACTTT
CTTCATGCAG CGAAACTTAT TAAAGATCAT CAAGTGAAAG TTCCGACTTA TTTAGTACCA
GCAACTCAGA AAGTTTATGA GGATTTATTT ATTATTAAAC ATGATGGAAA AACTCTCTCA
GAAATATTTT TAGATGCTGG TTGTATTGAA CCTGCAGCTC CATCTTGTGC CGCTTGTTTA
GGAGGACCAA AAGATACATT TGGGCGATTA AATGAACCGG AAATTTGTGT GTCTACAACT
AATCGTAATT TTCCTGGTCG AATGGGAAAT AAACAGGCAC AAGTCTATTT AGCTTCTCCC
TATACAGCAG CAGCTTCAGC TTTAACTGGA TATGTTACTG ACCCAAGAGA ATTTATGTAA
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| Protein sequence | MTMTMVEKIL AKASGKSTVN PGENIWVNVD VLMTHDVCGP GTIGIFKREF GENAKVWDKE
KIVLIPDHYI FTADERANRN VDILRDFAQE QNIKYFYDII ERSNFKANPD YKGVCHVALA
QEGHTRPGEV LFGTDSHTCN AGAFGEFATG IGNTDAAFIA GTGKLLVKVP ATMRFILNGE
MPNYLLAKDL ILQIIGDISV SGATYRTMEF AGETVGQMTM EERMTLCNMV IEAGGKNGVI
APDEMTFEYL RGRTDKPFES FYSDKNAEFY SDRSYDVTKL EPVVAKPHSP DNKELARNCQ
DVKIDRVYIG SCTGGKTSDF LHAAKLIKDH QVKVPTYLVP ATQKVYEDLF IIKHDGKTLS
EIFLDAGCIE PAAPSCAACL GGPKDTFGRL NEPEICVSTT NRNFPGRMGN KQAQVYLASP
YTAAASALTG YVTDPREFM
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